Gene : Cagra.1718s0015 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED Genomic Order:  15
Name:  ? Cagra.1718s0015 Secondary Identifier:  ? PAC:28896629
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1718s0015 0.5kb upstream 0.5kb upstream 1122 true Scaffold1718: 47779-48900 Capsella grandiflora
Cagra.1718s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold1718: 47779-48278 Capsella grandiflora
Cagra.1718s0015 0.5kb downstream 0.5kb downstream 1122 true Scaffold1718: 48279-49400 Capsella grandiflora
Cagra.1718s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold1718: 48901-49400 Capsella grandiflora
Cagra.1718s0015 1.0kb upstream 1.0kb upstream 1622 true Scaffold1718: 47279-48900 Capsella grandiflora
Cagra.1718s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold1718: 47279-48278 Capsella grandiflora
Cagra.1718s0015 1.0kb downstream 1.0kb downstream 1622 true Scaffold1718: 48279-49900 Capsella grandiflora
Cagra.1718s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold1718: 48901-49900 Capsella grandiflora
Cagra.1718s0015 2.0kb upstream 2.0kb upstream 2622 true Scaffold1718: 46279-48900 Capsella grandiflora
Cagra.1718s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold1718: 46279-48278 Capsella grandiflora
Cagra.1718s0015 2.0kb downstream 2.0kb downstream 2622 true Scaffold1718: 48279-50900 Capsella grandiflora
Cagra.1718s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold1718: 48901-50900 Capsella grandiflora
Cagra.1718s0015 5.0kb upstream 5.0kb upstream 5622 true Scaffold1718: 43279-48900 Capsella grandiflora
Cagra.1718s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold1718: 43279-48278 Capsella grandiflora
Cagra.1718s0015 5.0kb downstream 5.0kb downstream 5622 true Scaffold1718: 48279-53900 Capsella grandiflora
Cagra.1718s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold1718: 48901-53900 Capsella grandiflora
Cagra.1718s0015 10.0kb upstream 10.0kb upstream 10622 true Scaffold1718: 38279-48900 Capsella grandiflora
Cagra.1718s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold1718: 38279-48278 Capsella grandiflora
Cagra.1718s0015 10.0kb downstream 10.0kb downstream 10622 true Scaffold1718: 48279-58900 Capsella grandiflora
Cagra.1718s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold1718: 48901-58900 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379689 5261 Brassicaceae View MSA
123833120 5264 Brassicales-Malvales View MSA
124348675 5266 SBM View MSA
124246766 5268 Malvidae View MSA
124072305 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain