Gene : Cagra.1838s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22952//PTHR22952:SF186 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Genomic Order:  4
Name:  ? Cagra.1838s0004 Secondary Identifier:  ? PAC:28918397
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1838s0004 0.5kb upstream 0.5kb upstream 1064 true Scaffold1838: 13680-14743 Capsella grandiflora
Cagra.1838s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1838: 13680-14179 Capsella grandiflora
Cagra.1838s0004 0.5kb downstream 0.5kb downstream 1064 true Scaffold1838: 14180-15243 Capsella grandiflora
Cagra.1838s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1838: 14744-15243 Capsella grandiflora
Cagra.1838s0004 1.0kb upstream 1.0kb upstream 1564 true Scaffold1838: 13180-14743 Capsella grandiflora
Cagra.1838s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1838: 13180-14179 Capsella grandiflora
Cagra.1838s0004 1.0kb downstream 1.0kb downstream 1564 true Scaffold1838: 14180-15743 Capsella grandiflora
Cagra.1838s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1838: 14744-15743 Capsella grandiflora
Cagra.1838s0004 2.0kb upstream 2.0kb upstream 2564 true Scaffold1838: 12180-14743 Capsella grandiflora
Cagra.1838s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1838: 12180-14179 Capsella grandiflora
Cagra.1838s0004 2.0kb downstream 2.0kb downstream 2564 true Scaffold1838: 14180-16743 Capsella grandiflora
Cagra.1838s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1838: 14744-16743 Capsella grandiflora
Cagra.1838s0004 5.0kb upstream 5.0kb upstream 5564 true Scaffold1838: 9180-14743 Capsella grandiflora
Cagra.1838s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1838: 9180-14179 Capsella grandiflora
Cagra.1838s0004 5.0kb downstream 5.0kb downstream 5564 true Scaffold1838: 14180-19743 Capsella grandiflora
Cagra.1838s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1838: 14744-19743 Capsella grandiflora
Cagra.1838s0004 10.0kb upstream 10.0kb upstream 10564 true Scaffold1838: 4180-14743 Capsella grandiflora
Cagra.1838s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1838: 4180-14179 Capsella grandiflora
Cagra.1838s0004 10.0kb downstream 10.0kb downstream 10564 true Scaffold1838: 14180-24743 Capsella grandiflora
Cagra.1838s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1838: 14744-24743 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381196 5261 Brassicaceae View MSA
123838297 5264 Brassicales-Malvales View MSA
124345477 5266 SBM View MSA
124252691 5268 Malvidae View MSA
124074698 5270 Rosid View MSA
123742420 5271 Pentapetalae View MSA
122791799 5272 Eudicot View MSA
122049154 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain