Gene : Cagra.0179s0019 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33132:SF2 - SERINE-RICH PROTEIN-LIKE PROTEIN Genomic Order:  19
Name:  ? Cagra.0179s0019 Secondary Identifier:  ? PAC:28909723
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0179s0019 0.5kb upstream 0.5kb upstream 1046 true Scaffold179: 79468-80513 Capsella grandiflora
Cagra.0179s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold179: 80014-80513 Capsella grandiflora
Cagra.0179s0019 0.5kb downstream 0.5kb downstream 1046 true Scaffold179: 78968-80013 Capsella grandiflora
Cagra.0179s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold179: 78968-79467 Capsella grandiflora
Cagra.0179s0019 1.0kb upstream 1.0kb upstream 1546 true Scaffold179: 79468-81013 Capsella grandiflora
Cagra.0179s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold179: 80014-81013 Capsella grandiflora
Cagra.0179s0019 1.0kb downstream 1.0kb downstream 1546 true Scaffold179: 78468-80013 Capsella grandiflora
Cagra.0179s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold179: 78468-79467 Capsella grandiflora
Cagra.0179s0019 2.0kb upstream 2.0kb upstream 2546 true Scaffold179: 79468-82013 Capsella grandiflora
Cagra.0179s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold179: 80014-82013 Capsella grandiflora
Cagra.0179s0019 2.0kb downstream 2.0kb downstream 2546 true Scaffold179: 77468-80013 Capsella grandiflora
Cagra.0179s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold179: 77468-79467 Capsella grandiflora
Cagra.0179s0019 5.0kb upstream 5.0kb upstream 5546 true Scaffold179: 79468-85013 Capsella grandiflora
Cagra.0179s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold179: 80014-85013 Capsella grandiflora
Cagra.0179s0019 5.0kb downstream 5.0kb downstream 5546 true Scaffold179: 74468-80013 Capsella grandiflora
Cagra.0179s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold179: 74468-79467 Capsella grandiflora
Cagra.0179s0019 10.0kb upstream 10.0kb upstream 10546 true Scaffold179: 79468-90013 Capsella grandiflora
Cagra.0179s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold179: 80014-90013 Capsella grandiflora
Cagra.0179s0019 10.0kb downstream 10.0kb downstream 10546 true Scaffold179: 69468-80013 Capsella grandiflora
Cagra.0179s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold179: 69468-79467 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360908 5261 Brassicaceae View MSA
123798057 5264 Brassicales-Malvales View MSA
124295738 5266 SBM View MSA
124248143 5268 Malvidae View MSA
124051129 5270 Rosid View MSA
123742040 5271 Pentapetalae View MSA
122770182 5272 Eudicot View MSA
122050175 5273 Angiosperm View MSA
121348989 5274 Embryophyte View MSA
123381114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain