Gene : Cagra.0179s0037 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13026 - NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52 Genomic Order:  37
Name:  ? Cagra.0179s0037 Secondary Identifier:  ? PAC:28909733
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0179s0037 0.5kb upstream 0.5kb upstream 2093 true Scaffold179: 151981-154073 Capsella grandiflora
Cagra.0179s0037 0.5kb upstream 0.5kb upstream 500 false Scaffold179: 153574-154073 Capsella grandiflora
Cagra.0179s0037 0.5kb downstream 0.5kb downstream 2093 true Scaffold179: 151481-153573 Capsella grandiflora
Cagra.0179s0037 0.5kb downstream 0.5kb downstream 500 false Scaffold179: 151481-151980 Capsella grandiflora
Cagra.0179s0037 1.0kb upstream 1.0kb upstream 2593 true Scaffold179: 151981-154573 Capsella grandiflora
Cagra.0179s0037 1.0kb upstream 1.0kb upstream 1000 false Scaffold179: 153574-154573 Capsella grandiflora
Cagra.0179s0037 1.0kb downstream 1.0kb downstream 2593 true Scaffold179: 150981-153573 Capsella grandiflora
Cagra.0179s0037 1.0kb downstream 1.0kb downstream 1000 false Scaffold179: 150981-151980 Capsella grandiflora
Cagra.0179s0037 2.0kb upstream 2.0kb upstream 3593 true Scaffold179: 151981-155573 Capsella grandiflora
Cagra.0179s0037 2.0kb upstream 2.0kb upstream 2000 false Scaffold179: 153574-155573 Capsella grandiflora
Cagra.0179s0037 2.0kb downstream 2.0kb downstream 3593 true Scaffold179: 149981-153573 Capsella grandiflora
Cagra.0179s0037 2.0kb downstream 2.0kb downstream 2000 false Scaffold179: 149981-151980 Capsella grandiflora
Cagra.0179s0037 5.0kb upstream 5.0kb upstream 6593 true Scaffold179: 151981-158573 Capsella grandiflora
Cagra.0179s0037 5.0kb upstream 5.0kb upstream 5000 false Scaffold179: 153574-158573 Capsella grandiflora
Cagra.0179s0037 5.0kb downstream 5.0kb downstream 6593 true Scaffold179: 146981-153573 Capsella grandiflora
Cagra.0179s0037 5.0kb downstream 5.0kb downstream 5000 false Scaffold179: 146981-151980 Capsella grandiflora
Cagra.0179s0037 10.0kb upstream 10.0kb upstream 11593 true Scaffold179: 151981-163573 Capsella grandiflora
Cagra.0179s0037 10.0kb upstream 10.0kb upstream 10000 false Scaffold179: 153574-163573 Capsella grandiflora
Cagra.0179s0037 10.0kb downstream 10.0kb downstream 11593 true Scaffold179: 141981-153573 Capsella grandiflora
Cagra.0179s0037 10.0kb downstream 10.0kb downstream 10000 false Scaffold179: 141981-151980 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041241 5273 Angiosperm View MSA
122370665 5261 Brassicaceae View MSA
123836326 5264 Brassicales-Malvales View MSA
124345849 5266 SBM View MSA
124244164 5268 Malvidae View MSA
124064364 5270 Rosid View MSA
123737116 5271 Pentapetalae View MSA
122788031 5272 Eudicot View MSA
121344172 5274 Embryophyte View MSA
123424078 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain