Gene : Cagra.18121s0016 C. grandiflora v1.1
Defline:  (1 of 43) PF13912 - C2H2-type zinc finger (zf-C2H2_6) Genomic Order:  16
Name:  ? Cagra.18121s0016 Secondary Identifier:  ? PAC:28914952
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.18121s0016 0.5kb upstream 0.5kb upstream 1186 true Scaffold18121: 61079-62264 Capsella grandiflora
Cagra.18121s0016 0.5kb upstream 0.5kb upstream 244 false Scaffold18121: 62021-62264 Capsella grandiflora
Cagra.18121s0016 0.5kb downstream 0.5kb downstream 1442 true Scaffold18121: 60579-62020 Capsella grandiflora
Cagra.18121s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold18121: 60579-61078 Capsella grandiflora
Cagra.18121s0016 1.0kb upstream 1.0kb upstream 1186 true Scaffold18121: 61079-62264 Capsella grandiflora
Cagra.18121s0016 1.0kb upstream 1.0kb upstream 244 false Scaffold18121: 62021-62264 Capsella grandiflora
Cagra.18121s0016 1.0kb downstream 1.0kb downstream 1942 true Scaffold18121: 60079-62020 Capsella grandiflora
Cagra.18121s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold18121: 60079-61078 Capsella grandiflora
Cagra.18121s0016 2.0kb upstream 2.0kb upstream 1186 true Scaffold18121: 61079-62264 Capsella grandiflora
Cagra.18121s0016 2.0kb upstream 2.0kb upstream 244 false Scaffold18121: 62021-62264 Capsella grandiflora
Cagra.18121s0016 2.0kb downstream 2.0kb downstream 2942 true Scaffold18121: 59079-62020 Capsella grandiflora
Cagra.18121s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold18121: 59079-61078 Capsella grandiflora
Cagra.18121s0016 5.0kb upstream 5.0kb upstream 1186 true Scaffold18121: 61079-62264 Capsella grandiflora
Cagra.18121s0016 5.0kb upstream 5.0kb upstream 244 false Scaffold18121: 62021-62264 Capsella grandiflora
Cagra.18121s0016 5.0kb downstream 5.0kb downstream 5942 true Scaffold18121: 56079-62020 Capsella grandiflora
Cagra.18121s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold18121: 56079-61078 Capsella grandiflora
Cagra.18121s0016 10.0kb upstream 10.0kb upstream 1186 true Scaffold18121: 61079-62264 Capsella grandiflora
Cagra.18121s0016 10.0kb upstream 10.0kb upstream 244 false Scaffold18121: 62021-62264 Capsella grandiflora
Cagra.18121s0016 10.0kb downstream 10.0kb downstream 10942 true Scaffold18121: 51079-62020 Capsella grandiflora
Cagra.18121s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold18121: 51079-61078 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373114 5261 Brassicaceae View MSA
123839815 5264 Brassicales-Malvales View MSA
124345011 5266 SBM View MSA
124246580 5268 Malvidae View MSA
124072849 5270 Rosid View MSA
123747736 5271 Pentapetalae View MSA
122788735 5272 Eudicot View MSA
122049526 5273 Angiosperm View MSA
121348741 5274 Embryophyte View MSA
123380998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain