Gene : Cagra.18132s0001 C. grandiflora v1.1
Defline:  (1 of 8) PTHR21141 - 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER Genomic Order:  1
Name:  ? Cagra.18132s0001 Secondary Identifier:  ? PAC:28901347
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.18132s0001 0.5kb upstream 0.5kb upstream 1136 true Scaffold18132: 3225-4360 Capsella grandiflora
Cagra.18132s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold18132: 3225-3724 Capsella grandiflora
Cagra.18132s0001 0.5kb downstream 0.5kb downstream 1136 true Scaffold18132: 3725-4860 Capsella grandiflora
Cagra.18132s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold18132: 4361-4860 Capsella grandiflora
Cagra.18132s0001 1.0kb upstream 1.0kb upstream 1636 true Scaffold18132: 2725-4360 Capsella grandiflora
Cagra.18132s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold18132: 2725-3724 Capsella grandiflora
Cagra.18132s0001 1.0kb downstream 1.0kb downstream 1636 true Scaffold18132: 3725-5360 Capsella grandiflora
Cagra.18132s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold18132: 4361-5360 Capsella grandiflora
Cagra.18132s0001 2.0kb upstream 2.0kb upstream 2636 true Scaffold18132: 1725-4360 Capsella grandiflora
Cagra.18132s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold18132: 1725-3724 Capsella grandiflora
Cagra.18132s0001 2.0kb downstream 2.0kb downstream 2636 true Scaffold18132: 3725-6360 Capsella grandiflora
Cagra.18132s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold18132: 4361-6360 Capsella grandiflora
Cagra.18132s0001 5.0kb upstream 5.0kb upstream 4360 true Scaffold18132: 1-4360 Capsella grandiflora
Cagra.18132s0001 5.0kb upstream 5.0kb upstream 3724 false Scaffold18132: 1-3724 Capsella grandiflora
Cagra.18132s0001 5.0kb downstream 5.0kb downstream 5636 true Scaffold18132: 3725-9360 Capsella grandiflora
Cagra.18132s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold18132: 4361-9360 Capsella grandiflora
Cagra.18132s0001 10.0kb upstream 10.0kb upstream 4360 true Scaffold18132: 1-4360 Capsella grandiflora
Cagra.18132s0001 10.0kb upstream 10.0kb upstream 3724 false Scaffold18132: 1-3724 Capsella grandiflora
Cagra.18132s0001 10.0kb downstream 10.0kb downstream 7129 true Scaffold18132: 3725-10853 Capsella grandiflora
Cagra.18132s0001 10.0kb downstream 10.0kb downstream 6493 false Scaffold18132: 4361-10853 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041516 5273 Angiosperm View MSA
122377646 5261 Brassicaceae View MSA
123842183 5264 Brassicales-Malvales View MSA
124349762 5266 SBM View MSA
124251288 5268 Malvidae View MSA
124073066 5270 Rosid View MSA
123742141 5271 Pentapetalae View MSA
122795888 5272 Eudicot View MSA
123429183 5275 Viridiplantae View MSA
121351420 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain