Gene : Cagra.1772s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11945:SF183 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED Genomic Order:  3
Name:  ? Cagra.1772s0003 Secondary Identifier:  ? PAC:28906920
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1772s0003 0.5kb upstream 0.5kb upstream 1433 true Scaffold1772: 4759-6191 Capsella grandiflora
Cagra.1772s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1772: 5692-6191 Capsella grandiflora
Cagra.1772s0003 0.5kb downstream 0.5kb downstream 1433 true Scaffold1772: 4259-5691 Capsella grandiflora
Cagra.1772s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1772: 4259-4758 Capsella grandiflora
Cagra.1772s0003 1.0kb upstream 1.0kb upstream 1933 true Scaffold1772: 4759-6691 Capsella grandiflora
Cagra.1772s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1772: 5692-6691 Capsella grandiflora
Cagra.1772s0003 1.0kb downstream 1.0kb downstream 1933 true Scaffold1772: 3759-5691 Capsella grandiflora
Cagra.1772s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1772: 3759-4758 Capsella grandiflora
Cagra.1772s0003 2.0kb upstream 2.0kb upstream 2933 true Scaffold1772: 4759-7691 Capsella grandiflora
Cagra.1772s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1772: 5692-7691 Capsella grandiflora
Cagra.1772s0003 2.0kb downstream 2.0kb downstream 2933 true Scaffold1772: 2759-5691 Capsella grandiflora
Cagra.1772s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1772: 2759-4758 Capsella grandiflora
Cagra.1772s0003 5.0kb upstream 5.0kb upstream 5933 true Scaffold1772: 4759-10691 Capsella grandiflora
Cagra.1772s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1772: 5692-10691 Capsella grandiflora
Cagra.1772s0003 5.0kb downstream 5.0kb downstream 5691 true Scaffold1772: 1-5691 Capsella grandiflora
Cagra.1772s0003 5.0kb downstream 5.0kb downstream 4758 false Scaffold1772: 1-4758 Capsella grandiflora
Cagra.1772s0003 10.0kb upstream 10.0kb upstream 10933 true Scaffold1772: 4759-15691 Capsella grandiflora
Cagra.1772s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1772: 5692-15691 Capsella grandiflora
Cagra.1772s0003 10.0kb downstream 10.0kb downstream 5691 true Scaffold1772: 1-5691 Capsella grandiflora
Cagra.1772s0003 10.0kb downstream 10.0kb downstream 4758 false Scaffold1772: 1-4758 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378447 5261 Brassicaceae View MSA
123841143 5264 Brassicales-Malvales View MSA
124347196 5266 SBM View MSA
124250364 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain