Gene : Cagra.1777s0010 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11721 - 60S RIBOSOMAL PROTEIN L27A Genomic Order:  10
Name:  ? Cagra.1777s0010 Secondary Identifier:  ? PAC:28910318
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1777s0010 0.5kb upstream 0.5kb upstream 1075 true Scaffold1777: 45590-46664 Capsella grandiflora
Cagra.1777s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1777: 45590-46089 Capsella grandiflora
Cagra.1777s0010 0.5kb downstream 0.5kb downstream 1075 true Scaffold1777: 46090-47164 Capsella grandiflora
Cagra.1777s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1777: 46665-47164 Capsella grandiflora
Cagra.1777s0010 1.0kb upstream 1.0kb upstream 1575 true Scaffold1777: 45090-46664 Capsella grandiflora
Cagra.1777s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1777: 45090-46089 Capsella grandiflora
Cagra.1777s0010 1.0kb downstream 1.0kb downstream 1575 true Scaffold1777: 46090-47664 Capsella grandiflora
Cagra.1777s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1777: 46665-47664 Capsella grandiflora
Cagra.1777s0010 2.0kb upstream 2.0kb upstream 2575 true Scaffold1777: 44090-46664 Capsella grandiflora
Cagra.1777s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1777: 44090-46089 Capsella grandiflora
Cagra.1777s0010 2.0kb downstream 2.0kb downstream 2575 true Scaffold1777: 46090-48664 Capsella grandiflora
Cagra.1777s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold1777: 46665-48664 Capsella grandiflora
Cagra.1777s0010 5.0kb upstream 5.0kb upstream 5575 true Scaffold1777: 41090-46664 Capsella grandiflora
Cagra.1777s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1777: 41090-46089 Capsella grandiflora
Cagra.1777s0010 5.0kb downstream 5.0kb downstream 5575 true Scaffold1777: 46090-51664 Capsella grandiflora
Cagra.1777s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold1777: 46665-51664 Capsella grandiflora
Cagra.1777s0010 10.0kb upstream 10.0kb upstream 10575 true Scaffold1777: 36090-46664 Capsella grandiflora
Cagra.1777s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold1777: 36090-46089 Capsella grandiflora
Cagra.1777s0010 10.0kb downstream 10.0kb downstream 10575 true Scaffold1777: 46090-56664 Capsella grandiflora
Cagra.1777s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold1777: 46665-56664 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362337 5261 Brassicaceae View MSA
123835993 5264 Brassicales-Malvales View MSA
124322120 5266 SBM View MSA
124248893 5268 Malvidae View MSA
124061356 5270 Rosid View MSA
123746209 5271 Pentapetalae View MSA
122794134 5272 Eudicot View MSA
122049114 5273 Angiosperm View MSA
121346652 5274 Embryophyte View MSA
123426087 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain