Gene : Cagra.1777s0029 C. grandiflora v1.1
Defline:  (1 of 7) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  29
Name:  ? Cagra.1777s0029 Secondary Identifier:  ? PAC:28910361
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1777s0029 0.5kb upstream 0.5kb upstream 1547 true Scaffold1777: 137359-138905 Capsella grandiflora
Cagra.1777s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold1777: 137359-137858 Capsella grandiflora
Cagra.1777s0029 0.5kb downstream 0.5kb downstream 1547 true Scaffold1777: 137859-139405 Capsella grandiflora
Cagra.1777s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold1777: 138906-139405 Capsella grandiflora
Cagra.1777s0029 1.0kb upstream 1.0kb upstream 2047 true Scaffold1777: 136859-138905 Capsella grandiflora
Cagra.1777s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold1777: 136859-137858 Capsella grandiflora
Cagra.1777s0029 1.0kb downstream 1.0kb downstream 2047 true Scaffold1777: 137859-139905 Capsella grandiflora
Cagra.1777s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold1777: 138906-139905 Capsella grandiflora
Cagra.1777s0029 2.0kb upstream 2.0kb upstream 3047 true Scaffold1777: 135859-138905 Capsella grandiflora
Cagra.1777s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold1777: 135859-137858 Capsella grandiflora
Cagra.1777s0029 2.0kb downstream 2.0kb downstream 3047 true Scaffold1777: 137859-140905 Capsella grandiflora
Cagra.1777s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold1777: 138906-140905 Capsella grandiflora
Cagra.1777s0029 5.0kb upstream 5.0kb upstream 6047 true Scaffold1777: 132859-138905 Capsella grandiflora
Cagra.1777s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold1777: 132859-137858 Capsella grandiflora
Cagra.1777s0029 5.0kb downstream 5.0kb downstream 6047 true Scaffold1777: 137859-143905 Capsella grandiflora
Cagra.1777s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold1777: 138906-143905 Capsella grandiflora
Cagra.1777s0029 10.0kb upstream 10.0kb upstream 11047 true Scaffold1777: 127859-138905 Capsella grandiflora
Cagra.1777s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold1777: 127859-137858 Capsella grandiflora
Cagra.1777s0029 10.0kb downstream 10.0kb downstream 11047 true Scaffold1777: 137859-148905 Capsella grandiflora
Cagra.1777s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold1777: 138906-148905 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375709 5261 Brassicaceae View MSA
123836649 5264 Brassicales-Malvales View MSA
124345489 5266 SBM View MSA
124246091 5268 Malvidae View MSA
124070219 5270 Rosid View MSA
123743916 5271 Pentapetalae View MSA
122785611 5272 Eudicot View MSA
122048154 5273 Angiosperm View MSA
121310868 5274 Embryophyte View MSA
123348251 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain