Gene : Cagra.1750s0001 C. grandiflora v1.1
Defline:  (1 of 65) PF03478 - Protein of unknown function (DUF295) (DUF295) Genomic Order:  1
Name:  ? Cagra.1750s0001 Secondary Identifier:  ? PAC:28907159
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1750s0001 0.5kb upstream 0.5kb upstream 1598 true Scaffold1750: 419-2016 Capsella grandiflora
Cagra.1750s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1750: 1517-2016 Capsella grandiflora
Cagra.1750s0001 0.5kb downstream 0.5kb downstream 1516 true Scaffold1750: 1-1516 Capsella grandiflora
Cagra.1750s0001 0.5kb downstream 0.5kb downstream 418 false Scaffold1750: 1-418 Capsella grandiflora
Cagra.1750s0001 1.0kb upstream 1.0kb upstream 2098 true Scaffold1750: 419-2516 Capsella grandiflora
Cagra.1750s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold1750: 1517-2516 Capsella grandiflora
Cagra.1750s0001 1.0kb downstream 1.0kb downstream 1516 true Scaffold1750: 1-1516 Capsella grandiflora
Cagra.1750s0001 1.0kb downstream 1.0kb downstream 418 false Scaffold1750: 1-418 Capsella grandiflora
Cagra.1750s0001 2.0kb upstream 2.0kb upstream 3098 true Scaffold1750: 419-3516 Capsella grandiflora
Cagra.1750s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold1750: 1517-3516 Capsella grandiflora
Cagra.1750s0001 2.0kb downstream 2.0kb downstream 1516 true Scaffold1750: 1-1516 Capsella grandiflora
Cagra.1750s0001 2.0kb downstream 2.0kb downstream 418 false Scaffold1750: 1-418 Capsella grandiflora
Cagra.1750s0001 5.0kb upstream 5.0kb upstream 6098 true Scaffold1750: 419-6516 Capsella grandiflora
Cagra.1750s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold1750: 1517-6516 Capsella grandiflora
Cagra.1750s0001 5.0kb downstream 5.0kb downstream 1516 true Scaffold1750: 1-1516 Capsella grandiflora
Cagra.1750s0001 5.0kb downstream 5.0kb downstream 418 false Scaffold1750: 1-418 Capsella grandiflora
Cagra.1750s0001 10.0kb upstream 10.0kb upstream 11098 true Scaffold1750: 419-11516 Capsella grandiflora
Cagra.1750s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold1750: 1517-11516 Capsella grandiflora
Cagra.1750s0001 10.0kb downstream 10.0kb downstream 1516 true Scaffold1750: 1-1516 Capsella grandiflora
Cagra.1750s0001 10.0kb downstream 10.0kb downstream 418 false Scaffold1750: 1-418 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364386 5261 Brassicaceae View MSA
123798745 5264 Brassicales-Malvales View MSA
124296341 5266 SBM View MSA
124148518 5268 Malvidae View MSA
124038282 5270 Rosid View MSA
123753146 5271 Pentapetalae View MSA
122797944 5272 Eudicot View MSA
122050591 5273 Angiosperm View MSA
121312011 5274 Embryophyte View MSA
123349228 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain