Gene : Cagra.1934s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR34777:SF1 - VQ MOTIF-CONTAINING PROTEIN Genomic Order:  3
Name:  ? Cagra.1934s0003 Secondary Identifier:  ? PAC:28917199
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1934s0003 0.5kb upstream 0.5kb upstream 836 true Scaffold1934: 15731-16566 Capsella grandiflora
Cagra.1934s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1934: 16067-16566 Capsella grandiflora
Cagra.1934s0003 0.5kb downstream 0.5kb downstream 836 true Scaffold1934: 15231-16066 Capsella grandiflora
Cagra.1934s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1934: 15231-15730 Capsella grandiflora
Cagra.1934s0003 1.0kb upstream 1.0kb upstream 1336 true Scaffold1934: 15731-17066 Capsella grandiflora
Cagra.1934s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1934: 16067-17066 Capsella grandiflora
Cagra.1934s0003 1.0kb downstream 1.0kb downstream 1336 true Scaffold1934: 14731-16066 Capsella grandiflora
Cagra.1934s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1934: 14731-15730 Capsella grandiflora
Cagra.1934s0003 2.0kb upstream 2.0kb upstream 2336 true Scaffold1934: 15731-18066 Capsella grandiflora
Cagra.1934s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1934: 16067-18066 Capsella grandiflora
Cagra.1934s0003 2.0kb downstream 2.0kb downstream 2336 true Scaffold1934: 13731-16066 Capsella grandiflora
Cagra.1934s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1934: 13731-15730 Capsella grandiflora
Cagra.1934s0003 5.0kb upstream 5.0kb upstream 5336 true Scaffold1934: 15731-21066 Capsella grandiflora
Cagra.1934s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1934: 16067-21066 Capsella grandiflora
Cagra.1934s0003 5.0kb downstream 5.0kb downstream 5336 true Scaffold1934: 10731-16066 Capsella grandiflora
Cagra.1934s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1934: 10731-15730 Capsella grandiflora
Cagra.1934s0003 10.0kb upstream 10.0kb upstream 5368 true Scaffold1934: 15731-21098 Capsella grandiflora
Cagra.1934s0003 10.0kb upstream 10.0kb upstream 5032 false Scaffold1934: 16067-21098 Capsella grandiflora
Cagra.1934s0003 10.0kb downstream 10.0kb downstream 10336 true Scaffold1934: 5731-16066 Capsella grandiflora
Cagra.1934s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1934: 5731-15730 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026461 5273 Angiosperm View MSA
122379995 5261 Brassicaceae View MSA
123840624 5264 Brassicales-Malvales View MSA
124342218 5266 SBM View MSA
124240018 5268 Malvidae View MSA
124050155 5270 Rosid View MSA
123744131 5271 Pentapetalae View MSA
122770912 5272 Eudicot View MSA
121296343 5274 Embryophyte View MSA
123334522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain