Gene : Cagra.1945s0011 C. grandiflora v1.1

Genomic Order:  11 Name:  ? Cagra.1945s0011
Secondary Identifier:  ? PAC:28901633

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1945s0011 0.5kb upstream 0.5kb upstream 1229 true Scaffold1945: 45877-47105 Capsella grandiflora
Cagra.1945s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold1945: 45877-46376 Capsella grandiflora
Cagra.1945s0011 0.5kb downstream 0.5kb downstream 1229 true Scaffold1945: 46377-47605 Capsella grandiflora
Cagra.1945s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold1945: 47106-47605 Capsella grandiflora
Cagra.1945s0011 1.0kb upstream 1.0kb upstream 1729 true Scaffold1945: 45377-47105 Capsella grandiflora
Cagra.1945s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold1945: 45377-46376 Capsella grandiflora
Cagra.1945s0011 1.0kb downstream 1.0kb downstream 1729 true Scaffold1945: 46377-48105 Capsella grandiflora
Cagra.1945s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold1945: 47106-48105 Capsella grandiflora
Cagra.1945s0011 2.0kb upstream 2.0kb upstream 2729 true Scaffold1945: 44377-47105 Capsella grandiflora
Cagra.1945s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold1945: 44377-46376 Capsella grandiflora
Cagra.1945s0011 2.0kb downstream 2.0kb downstream 2729 true Scaffold1945: 46377-49105 Capsella grandiflora
Cagra.1945s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold1945: 47106-49105 Capsella grandiflora
Cagra.1945s0011 5.0kb upstream 5.0kb upstream 5729 true Scaffold1945: 41377-47105 Capsella grandiflora
Cagra.1945s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold1945: 41377-46376 Capsella grandiflora
Cagra.1945s0011 5.0kb downstream 5.0kb downstream 5729 true Scaffold1945: 46377-52105 Capsella grandiflora
Cagra.1945s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold1945: 47106-52105 Capsella grandiflora
Cagra.1945s0011 10.0kb upstream 10.0kb upstream 10729 true Scaffold1945: 36377-47105 Capsella grandiflora
Cagra.1945s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold1945: 36377-46376 Capsella grandiflora
Cagra.1945s0011 10.0kb downstream 10.0kb downstream 10729 true Scaffold1945: 46377-57105 Capsella grandiflora
Cagra.1945s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold1945: 47106-57105 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374398 5261 Brassicaceae View MSA
123838334 5264 Brassicales-Malvales View MSA
124341922 5266 SBM View MSA
124253974 5268 Malvidae View MSA
124070347 5270 Rosid View MSA
123745307 5271 Pentapetalae View MSA
122786799 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain