Gene : Cagra.1954s0012 C. grandiflora v1.1
Defline:  (1 of 1) 1.8.1.7//1.8.1.9 - Glutathione-disulfide reductase / NADPH:oxidized-glutathione oxidoreductase // Thioredoxin-disulfide reductase / Thioredoxin reductase (NADPH) Genomic Order:  12
Name:  ? Cagra.1954s0012 Secondary Identifier:  ? PAC:28909624
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora GLUT-REDOX-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-4081 Capsella grandiflora pathologic  
Cgrandiflora THIOREDOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1954s0012 0.5kb upstream 0.5kb upstream 1050 true Scaffold1954: 42457-43506 Capsella grandiflora
Cagra.1954s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold1954: 42457-42956 Capsella grandiflora
Cagra.1954s0012 0.5kb downstream 0.5kb downstream 1050 true Scaffold1954: 42957-44006 Capsella grandiflora
Cagra.1954s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold1954: 43507-44006 Capsella grandiflora
Cagra.1954s0012 1.0kb upstream 1.0kb upstream 1550 true Scaffold1954: 41957-43506 Capsella grandiflora
Cagra.1954s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold1954: 41957-42956 Capsella grandiflora
Cagra.1954s0012 1.0kb downstream 1.0kb downstream 1550 true Scaffold1954: 42957-44506 Capsella grandiflora
Cagra.1954s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold1954: 43507-44506 Capsella grandiflora
Cagra.1954s0012 2.0kb upstream 2.0kb upstream 2550 true Scaffold1954: 40957-43506 Capsella grandiflora
Cagra.1954s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold1954: 40957-42956 Capsella grandiflora
Cagra.1954s0012 2.0kb downstream 2.0kb downstream 2550 true Scaffold1954: 42957-45506 Capsella grandiflora
Cagra.1954s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold1954: 43507-45506 Capsella grandiflora
Cagra.1954s0012 5.0kb upstream 5.0kb upstream 5550 true Scaffold1954: 37957-43506 Capsella grandiflora
Cagra.1954s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold1954: 37957-42956 Capsella grandiflora
Cagra.1954s0012 5.0kb downstream 5.0kb downstream 5550 true Scaffold1954: 42957-48506 Capsella grandiflora
Cagra.1954s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold1954: 43507-48506 Capsella grandiflora
Cagra.1954s0012 10.0kb upstream 10.0kb upstream 10550 true Scaffold1954: 32957-43506 Capsella grandiflora
Cagra.1954s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold1954: 32957-42956 Capsella grandiflora
Cagra.1954s0012 10.0kb downstream 10.0kb downstream 10550 true Scaffold1954: 42957-53506 Capsella grandiflora
Cagra.1954s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold1954: 43507-53506 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370832 5261 Brassicaceae View MSA
123840190 5264 Brassicales-Malvales View MSA
124342683 5266 SBM View MSA
124237832 5268 Malvidae View MSA
124066689 5270 Rosid View MSA
123752852 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain