Gene : Cagra.1912s0008 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  8
Name:  ? Cagra.1912s0008 Secondary Identifier:  ? PAC:28897818
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1912s0008 0.5kb upstream 0.5kb upstream 1880 true Scaffold1912: 24672-26551 Capsella grandiflora
Cagra.1912s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1912: 24672-25171 Capsella grandiflora
Cagra.1912s0008 0.5kb downstream 0.5kb downstream 1880 true Scaffold1912: 25172-27051 Capsella grandiflora
Cagra.1912s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1912: 26552-27051 Capsella grandiflora
Cagra.1912s0008 1.0kb upstream 1.0kb upstream 2380 true Scaffold1912: 24172-26551 Capsella grandiflora
Cagra.1912s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1912: 24172-25171 Capsella grandiflora
Cagra.1912s0008 1.0kb downstream 1.0kb downstream 2380 true Scaffold1912: 25172-27551 Capsella grandiflora
Cagra.1912s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1912: 26552-27551 Capsella grandiflora
Cagra.1912s0008 2.0kb upstream 2.0kb upstream 3380 true Scaffold1912: 23172-26551 Capsella grandiflora
Cagra.1912s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1912: 23172-25171 Capsella grandiflora
Cagra.1912s0008 2.0kb downstream 2.0kb downstream 3380 true Scaffold1912: 25172-28551 Capsella grandiflora
Cagra.1912s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1912: 26552-28551 Capsella grandiflora
Cagra.1912s0008 5.0kb upstream 5.0kb upstream 6380 true Scaffold1912: 20172-26551 Capsella grandiflora
Cagra.1912s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1912: 20172-25171 Capsella grandiflora
Cagra.1912s0008 5.0kb downstream 5.0kb downstream 6380 true Scaffold1912: 25172-31551 Capsella grandiflora
Cagra.1912s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1912: 26552-31551 Capsella grandiflora
Cagra.1912s0008 10.0kb upstream 10.0kb upstream 11380 true Scaffold1912: 15172-26551 Capsella grandiflora
Cagra.1912s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1912: 15172-25171 Capsella grandiflora
Cagra.1912s0008 10.0kb downstream 10.0kb downstream 11380 true Scaffold1912: 25172-36551 Capsella grandiflora
Cagra.1912s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1912: 26552-36551 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332959 5261 Brassicaceae Singleton cluster - no MSA
123841705 5264 Brassicales-Malvales View MSA
124337529 5266 SBM View MSA
124244878 5268 Malvidae View MSA
124063635 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain