Gene : Cagra.1838s0022 C. grandiflora v1.1
Defline:  (1 of 3) PF08312 - cwf21 domain (cwf21) Genomic Order:  22
Name:  ? Cagra.1838s0022 Secondary Identifier:  ? PAC:28918367
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1838s0022 0.5kb upstream 0.5kb upstream 890 true Scaffold1838: 80642-81531 Capsella grandiflora
Cagra.1838s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold1838: 80642-81141 Capsella grandiflora
Cagra.1838s0022 0.5kb downstream 0.5kb downstream 890 true Scaffold1838: 81142-82031 Capsella grandiflora
Cagra.1838s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold1838: 81532-82031 Capsella grandiflora
Cagra.1838s0022 1.0kb upstream 1.0kb upstream 1390 true Scaffold1838: 80142-81531 Capsella grandiflora
Cagra.1838s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold1838: 80142-81141 Capsella grandiflora
Cagra.1838s0022 1.0kb downstream 1.0kb downstream 1390 true Scaffold1838: 81142-82531 Capsella grandiflora
Cagra.1838s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold1838: 81532-82531 Capsella grandiflora
Cagra.1838s0022 2.0kb upstream 2.0kb upstream 2390 true Scaffold1838: 79142-81531 Capsella grandiflora
Cagra.1838s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold1838: 79142-81141 Capsella grandiflora
Cagra.1838s0022 2.0kb downstream 2.0kb downstream 2390 true Scaffold1838: 81142-83531 Capsella grandiflora
Cagra.1838s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold1838: 81532-83531 Capsella grandiflora
Cagra.1838s0022 5.0kb upstream 5.0kb upstream 5390 true Scaffold1838: 76142-81531 Capsella grandiflora
Cagra.1838s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold1838: 76142-81141 Capsella grandiflora
Cagra.1838s0022 5.0kb downstream 5.0kb downstream 5390 true Scaffold1838: 81142-86531 Capsella grandiflora
Cagra.1838s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold1838: 81532-86531 Capsella grandiflora
Cagra.1838s0022 10.0kb upstream 10.0kb upstream 10390 true Scaffold1838: 71142-81531 Capsella grandiflora
Cagra.1838s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold1838: 71142-81141 Capsella grandiflora
Cagra.1838s0022 10.0kb downstream 10.0kb downstream 10390 true Scaffold1838: 81142-91531 Capsella grandiflora
Cagra.1838s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold1838: 81532-91531 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332915 5261 Brassicaceae Singleton cluster - no MSA
123837763 5264 Brassicales-Malvales View MSA
124322352 5266 SBM View MSA
124169122 5268 Malvidae View MSA
124038624 5270 Rosid View MSA
123744127 5271 Pentapetalae View MSA
122795539 5272 Eudicot View MSA
122049103 5273 Angiosperm View MSA
121350185 5274 Embryophyte View MSA
123426025 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain