Gene : Cagra.1972s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32077:SF18 - FASCICLIN-LIKE ARABINOGALACTAN FAMILY PROTEIN Genomic Order:  3
Name:  ? Cagra.1972s0003 Secondary Identifier:  ? PAC:28915356
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1972s0003 0.5kb upstream 0.5kb upstream 1223 true Scaffold1972: 5501-6723 Capsella grandiflora
Cagra.1972s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1972: 6224-6723 Capsella grandiflora
Cagra.1972s0003 0.5kb downstream 0.5kb downstream 1223 true Scaffold1972: 5001-6223 Capsella grandiflora
Cagra.1972s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1972: 5001-5500 Capsella grandiflora
Cagra.1972s0003 1.0kb upstream 1.0kb upstream 1723 true Scaffold1972: 5501-7223 Capsella grandiflora
Cagra.1972s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1972: 6224-7223 Capsella grandiflora
Cagra.1972s0003 1.0kb downstream 1.0kb downstream 1723 true Scaffold1972: 4501-6223 Capsella grandiflora
Cagra.1972s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1972: 4501-5500 Capsella grandiflora
Cagra.1972s0003 2.0kb upstream 2.0kb upstream 2173 true Scaffold1972: 5501-7673 Capsella grandiflora
Cagra.1972s0003 2.0kb upstream 2.0kb upstream 1450 false Scaffold1972: 6224-7673 Capsella grandiflora
Cagra.1972s0003 2.0kb downstream 2.0kb downstream 2723 true Scaffold1972: 3501-6223 Capsella grandiflora
Cagra.1972s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1972: 3501-5500 Capsella grandiflora
Cagra.1972s0003 5.0kb upstream 5.0kb upstream 2173 true Scaffold1972: 5501-7673 Capsella grandiflora
Cagra.1972s0003 5.0kb upstream 5.0kb upstream 1450 false Scaffold1972: 6224-7673 Capsella grandiflora
Cagra.1972s0003 5.0kb downstream 5.0kb downstream 5723 true Scaffold1972: 501-6223 Capsella grandiflora
Cagra.1972s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1972: 501-5500 Capsella grandiflora
Cagra.1972s0003 10.0kb upstream 10.0kb upstream 2173 true Scaffold1972: 5501-7673 Capsella grandiflora
Cagra.1972s0003 10.0kb upstream 10.0kb upstream 1450 false Scaffold1972: 6224-7673 Capsella grandiflora
Cagra.1972s0003 10.0kb downstream 10.0kb downstream 6223 true Scaffold1972: 1-6223 Capsella grandiflora
Cagra.1972s0003 10.0kb downstream 10.0kb downstream 5500 false Scaffold1972: 1-5500 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791713 5273 Angiosperm View MSA
122374671 5261 Brassicaceae View MSA
123835147 5264 Brassicales-Malvales View MSA
124346577 5266 SBM View MSA
124244248 5268 Malvidae View MSA
124065751 5270 Rosid View MSA
123741582 5271 Pentapetalae View MSA
122786595 5272 Eudicot View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain