Gene : Cagra.0196s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31636:SF25 - SCARECROW-LIKE PROTEIN 26 Genomic Order:  6
Name:  ? Cagra.0196s0006 Secondary Identifier:  ? PAC:28915712
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0196s0006 0.5kb upstream 0.5kb upstream 2193 true Scaffold196: 23893-26085 Capsella grandiflora
Cagra.0196s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold196: 25586-26085 Capsella grandiflora
Cagra.0196s0006 0.5kb downstream 0.5kb downstream 2193 true Scaffold196: 23393-25585 Capsella grandiflora
Cagra.0196s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold196: 23393-23892 Capsella grandiflora
Cagra.0196s0006 1.0kb upstream 1.0kb upstream 2693 true Scaffold196: 23893-26585 Capsella grandiflora
Cagra.0196s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold196: 25586-26585 Capsella grandiflora
Cagra.0196s0006 1.0kb downstream 1.0kb downstream 2693 true Scaffold196: 22893-25585 Capsella grandiflora
Cagra.0196s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold196: 22893-23892 Capsella grandiflora
Cagra.0196s0006 2.0kb upstream 2.0kb upstream 3693 true Scaffold196: 23893-27585 Capsella grandiflora
Cagra.0196s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold196: 25586-27585 Capsella grandiflora
Cagra.0196s0006 2.0kb downstream 2.0kb downstream 3693 true Scaffold196: 21893-25585 Capsella grandiflora
Cagra.0196s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold196: 21893-23892 Capsella grandiflora
Cagra.0196s0006 5.0kb upstream 5.0kb upstream 3763 true Scaffold196: 23893-27655 Capsella grandiflora
Cagra.0196s0006 5.0kb upstream 5.0kb upstream 2070 false Scaffold196: 25586-27655 Capsella grandiflora
Cagra.0196s0006 5.0kb downstream 5.0kb downstream 6693 true Scaffold196: 18893-25585 Capsella grandiflora
Cagra.0196s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold196: 18893-23892 Capsella grandiflora
Cagra.0196s0006 10.0kb upstream 10.0kb upstream 3763 true Scaffold196: 23893-27655 Capsella grandiflora
Cagra.0196s0006 10.0kb upstream 10.0kb upstream 2070 false Scaffold196: 25586-27655 Capsella grandiflora
Cagra.0196s0006 10.0kb downstream 10.0kb downstream 11693 true Scaffold196: 13893-25585 Capsella grandiflora
Cagra.0196s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold196: 13893-23892 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361130 5261 Brassicaceae View MSA
123830757 5264 Brassicales-Malvales View MSA
124341223 5266 SBM View MSA
124253656 5268 Malvidae View MSA
124066104 5270 Rosid View MSA
123741330 5271 Pentapetalae View MSA
122785836 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain