Gene : Cagra.2098s0020 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10024:SF172 - C2 AND PLANT PHOSPHORIBOSYLTRANSFERASE DOMAIN-CONTAINING PROTEIN Genomic Order:  20
Name:  ? Cagra.2098s0020 Secondary Identifier:  ? PAC:28919580
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2098s0020 0.5kb upstream 0.5kb upstream 3569 true Scaffold2098: 67232-70800 Capsella grandiflora
Cagra.2098s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold2098: 70301-70800 Capsella grandiflora
Cagra.2098s0020 0.5kb downstream 0.5kb downstream 3569 true Scaffold2098: 66732-70300 Capsella grandiflora
Cagra.2098s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold2098: 66732-67231 Capsella grandiflora
Cagra.2098s0020 1.0kb upstream 1.0kb upstream 4069 true Scaffold2098: 67232-71300 Capsella grandiflora
Cagra.2098s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold2098: 70301-71300 Capsella grandiflora
Cagra.2098s0020 1.0kb downstream 1.0kb downstream 4069 true Scaffold2098: 66232-70300 Capsella grandiflora
Cagra.2098s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold2098: 66232-67231 Capsella grandiflora
Cagra.2098s0020 2.0kb upstream 2.0kb upstream 5069 true Scaffold2098: 67232-72300 Capsella grandiflora
Cagra.2098s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold2098: 70301-72300 Capsella grandiflora
Cagra.2098s0020 2.0kb downstream 2.0kb downstream 5069 true Scaffold2098: 65232-70300 Capsella grandiflora
Cagra.2098s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold2098: 65232-67231 Capsella grandiflora
Cagra.2098s0020 5.0kb upstream 5.0kb upstream 8069 true Scaffold2098: 67232-75300 Capsella grandiflora
Cagra.2098s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold2098: 70301-75300 Capsella grandiflora
Cagra.2098s0020 5.0kb downstream 5.0kb downstream 8069 true Scaffold2098: 62232-70300 Capsella grandiflora
Cagra.2098s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold2098: 62232-67231 Capsella grandiflora
Cagra.2098s0020 10.0kb upstream 10.0kb upstream 13069 true Scaffold2098: 67232-80300 Capsella grandiflora
Cagra.2098s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold2098: 70301-80300 Capsella grandiflora
Cagra.2098s0020 10.0kb downstream 10.0kb downstream 13069 true Scaffold2098: 57232-70300 Capsella grandiflora
Cagra.2098s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold2098: 57232-67231 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365255 5261 Brassicaceae View MSA
123831132 5264 Brassicales-Malvales View MSA
124339932 5266 SBM View MSA
124243133 5268 Malvidae View MSA
124063540 5270 Rosid View MSA
123748968 5271 Pentapetalae View MSA
122790054 5272 Eudicot View MSA
122049348 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain