Gene : Cagra.2044s0003 C. grandiflora v1.1
Defline:  (1 of 61) PF14368 - Probable lipid transfer (LTP_2) Genomic Order:  3
Name:  ? Cagra.2044s0003 Secondary Identifier:  ? PAC:28901065
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2044s0003 0.5kb upstream 0.5kb upstream 806 true Scaffold2044: 7148-7953 Capsella grandiflora
Cagra.2044s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2044: 7148-7647 Capsella grandiflora
Cagra.2044s0003 0.5kb downstream 0.5kb downstream 806 true Scaffold2044: 7648-8453 Capsella grandiflora
Cagra.2044s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2044: 7954-8453 Capsella grandiflora
Cagra.2044s0003 1.0kb upstream 1.0kb upstream 1306 true Scaffold2044: 6648-7953 Capsella grandiflora
Cagra.2044s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2044: 6648-7647 Capsella grandiflora
Cagra.2044s0003 1.0kb downstream 1.0kb downstream 1306 true Scaffold2044: 7648-8953 Capsella grandiflora
Cagra.2044s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2044: 7954-8953 Capsella grandiflora
Cagra.2044s0003 2.0kb upstream 2.0kb upstream 2306 true Scaffold2044: 5648-7953 Capsella grandiflora
Cagra.2044s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2044: 5648-7647 Capsella grandiflora
Cagra.2044s0003 2.0kb downstream 2.0kb downstream 2306 true Scaffold2044: 7648-9953 Capsella grandiflora
Cagra.2044s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2044: 7954-9953 Capsella grandiflora
Cagra.2044s0003 5.0kb upstream 5.0kb upstream 5306 true Scaffold2044: 2648-7953 Capsella grandiflora
Cagra.2044s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2044: 2648-7647 Capsella grandiflora
Cagra.2044s0003 5.0kb downstream 5.0kb downstream 5306 true Scaffold2044: 7648-12953 Capsella grandiflora
Cagra.2044s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2044: 7954-12953 Capsella grandiflora
Cagra.2044s0003 10.0kb upstream 10.0kb upstream 7953 true Scaffold2044: 1-7953 Capsella grandiflora
Cagra.2044s0003 10.0kb upstream 10.0kb upstream 7647 false Scaffold2044: 1-7647 Capsella grandiflora
Cagra.2044s0003 10.0kb downstream 10.0kb downstream 6959 true Scaffold2044: 7648-14606 Capsella grandiflora
Cagra.2044s0003 10.0kb downstream 10.0kb downstream 6653 false Scaffold2044: 7954-14606 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380476 5261 Brassicaceae View MSA
123802737 5264 Brassicales-Malvales View MSA
124299905 5266 SBM View MSA
124151206 5268 Malvidae View MSA
124050185 5270 Rosid View MSA
123741450 5271 Pentapetalae View MSA
122770052 5272 Eudicot View MSA
122049999 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain