Gene : Cagra.2007s0048 C. grandiflora v1.1
Defline:  (1 of 54) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  48
Name:  ? Cagra.2007s0048 Secondary Identifier:  ? PAC:28908613
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2007s0048 0.5kb upstream 0.5kb upstream 2366 true Scaffold2007: 183751-186116 Capsella grandiflora
Cagra.2007s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold2007: 185617-186116 Capsella grandiflora
Cagra.2007s0048 0.5kb downstream 0.5kb downstream 2366 true Scaffold2007: 183251-185616 Capsella grandiflora
Cagra.2007s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold2007: 183251-183750 Capsella grandiflora
Cagra.2007s0048 1.0kb upstream 1.0kb upstream 2866 true Scaffold2007: 183751-186616 Capsella grandiflora
Cagra.2007s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold2007: 185617-186616 Capsella grandiflora
Cagra.2007s0048 1.0kb downstream 1.0kb downstream 2866 true Scaffold2007: 182751-185616 Capsella grandiflora
Cagra.2007s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold2007: 182751-183750 Capsella grandiflora
Cagra.2007s0048 2.0kb upstream 2.0kb upstream 3866 true Scaffold2007: 183751-187616 Capsella grandiflora
Cagra.2007s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold2007: 185617-187616 Capsella grandiflora
Cagra.2007s0048 2.0kb downstream 2.0kb downstream 3866 true Scaffold2007: 181751-185616 Capsella grandiflora
Cagra.2007s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold2007: 181751-183750 Capsella grandiflora
Cagra.2007s0048 5.0kb upstream 5.0kb upstream 6866 true Scaffold2007: 183751-190616 Capsella grandiflora
Cagra.2007s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold2007: 185617-190616 Capsella grandiflora
Cagra.2007s0048 5.0kb downstream 5.0kb downstream 6866 true Scaffold2007: 178751-185616 Capsella grandiflora
Cagra.2007s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold2007: 178751-183750 Capsella grandiflora
Cagra.2007s0048 10.0kb upstream 10.0kb upstream 11866 true Scaffold2007: 183751-195616 Capsella grandiflora
Cagra.2007s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold2007: 185617-195616 Capsella grandiflora
Cagra.2007s0048 10.0kb downstream 10.0kb downstream 11866 true Scaffold2007: 173751-185616 Capsella grandiflora
Cagra.2007s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold2007: 173751-183750 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375786 5261 Brassicaceae View MSA
123831277 5264 Brassicales-Malvales View MSA
124344822 5266 SBM View MSA
124252297 5268 Malvidae View MSA
124072628 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain