Gene : Cagra.20132s0006 C. grandiflora v1.1
Defline:  (1 of 11) PTHR31662:SF1 - A_IG002N01.32 PROTEIN-RELATED Genomic Order:  6
Name:  ? Cagra.20132s0006 Secondary Identifier:  ? PAC:28906659
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.20132s0006 0.5kb upstream 0.5kb upstream 1667 true Scaffold20132: 13366-15032 Capsella grandiflora
Cagra.20132s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold20132: 13366-13865 Capsella grandiflora
Cagra.20132s0006 0.5kb downstream 0.5kb downstream 1667 true Scaffold20132: 13866-15532 Capsella grandiflora
Cagra.20132s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold20132: 15033-15532 Capsella grandiflora
Cagra.20132s0006 1.0kb upstream 1.0kb upstream 2167 true Scaffold20132: 12866-15032 Capsella grandiflora
Cagra.20132s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold20132: 12866-13865 Capsella grandiflora
Cagra.20132s0006 1.0kb downstream 1.0kb downstream 2167 true Scaffold20132: 13866-16032 Capsella grandiflora
Cagra.20132s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold20132: 15033-16032 Capsella grandiflora
Cagra.20132s0006 2.0kb upstream 2.0kb upstream 3167 true Scaffold20132: 11866-15032 Capsella grandiflora
Cagra.20132s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold20132: 11866-13865 Capsella grandiflora
Cagra.20132s0006 2.0kb downstream 2.0kb downstream 3167 true Scaffold20132: 13866-17032 Capsella grandiflora
Cagra.20132s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold20132: 15033-17032 Capsella grandiflora
Cagra.20132s0006 5.0kb upstream 5.0kb upstream 6167 true Scaffold20132: 8866-15032 Capsella grandiflora
Cagra.20132s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold20132: 8866-13865 Capsella grandiflora
Cagra.20132s0006 5.0kb downstream 5.0kb downstream 6167 true Scaffold20132: 13866-20032 Capsella grandiflora
Cagra.20132s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold20132: 15033-20032 Capsella grandiflora
Cagra.20132s0006 10.0kb upstream 10.0kb upstream 11167 true Scaffold20132: 3866-15032 Capsella grandiflora
Cagra.20132s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold20132: 3866-13865 Capsella grandiflora
Cagra.20132s0006 10.0kb downstream 10.0kb downstream 11167 true Scaffold20132: 13866-25032 Capsella grandiflora
Cagra.20132s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold20132: 15033-25032 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374387 5261 Brassicaceae View MSA
123837501 5264 Brassicales-Malvales View MSA
124345875 5266 SBM View MSA
124252419 5268 Malvidae View MSA
124072235 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain