Gene : Cagra.0202s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11229:SF5 - 50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC Genomic Order:  8
Name:  ? Cagra.0202s0008 Secondary Identifier:  ? PAC:28919080
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0202s0008 0.5kb upstream 0.5kb upstream 1316 true Scaffold202: 26537-27852 Capsella grandiflora
Cagra.0202s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold202: 27353-27852 Capsella grandiflora
Cagra.0202s0008 0.5kb downstream 0.5kb downstream 1316 true Scaffold202: 26037-27352 Capsella grandiflora
Cagra.0202s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold202: 26037-26536 Capsella grandiflora
Cagra.0202s0008 1.0kb upstream 1.0kb upstream 1816 true Scaffold202: 26537-28352 Capsella grandiflora
Cagra.0202s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold202: 27353-28352 Capsella grandiflora
Cagra.0202s0008 1.0kb downstream 1.0kb downstream 1816 true Scaffold202: 25537-27352 Capsella grandiflora
Cagra.0202s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold202: 25537-26536 Capsella grandiflora
Cagra.0202s0008 2.0kb upstream 2.0kb upstream 2816 true Scaffold202: 26537-29352 Capsella grandiflora
Cagra.0202s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold202: 27353-29352 Capsella grandiflora
Cagra.0202s0008 2.0kb downstream 2.0kb downstream 2816 true Scaffold202: 24537-27352 Capsella grandiflora
Cagra.0202s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold202: 24537-26536 Capsella grandiflora
Cagra.0202s0008 5.0kb upstream 5.0kb upstream 5816 true Scaffold202: 26537-32352 Capsella grandiflora
Cagra.0202s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold202: 27353-32352 Capsella grandiflora
Cagra.0202s0008 5.0kb downstream 5.0kb downstream 5816 true Scaffold202: 21537-27352 Capsella grandiflora
Cagra.0202s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold202: 21537-26536 Capsella grandiflora
Cagra.0202s0008 10.0kb upstream 10.0kb upstream 10816 true Scaffold202: 26537-37352 Capsella grandiflora
Cagra.0202s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold202: 27353-37352 Capsella grandiflora
Cagra.0202s0008 10.0kb downstream 10.0kb downstream 10816 true Scaffold202: 16537-27352 Capsella grandiflora
Cagra.0202s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold202: 16537-26536 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361264 5261 Brassicaceae View MSA
123827848 5264 Brassicales-Malvales View MSA
124339613 5266 SBM View MSA
124240687 5268 Malvidae View MSA
124065748 5270 Rosid View MSA
123738744 5271 Pentapetalae View MSA
122789869 5272 Eudicot View MSA
122045324 5273 Angiosperm View MSA
121345388 5274 Embryophyte View MSA
123425117 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain