Gene : Cagra.0202s0022 C. grandiflora v1.1
Defline:  (1 of 2) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  22
Name:  ? Cagra.0202s0022 Secondary Identifier:  ? PAC:28919062
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0202s0022 0.5kb upstream 0.5kb upstream 1531 true Scaffold202: 65885-67415 Capsella grandiflora
Cagra.0202s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold202: 66916-67415 Capsella grandiflora
Cagra.0202s0022 0.5kb downstream 0.5kb downstream 1531 true Scaffold202: 65385-66915 Capsella grandiflora
Cagra.0202s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold202: 65385-65884 Capsella grandiflora
Cagra.0202s0022 1.0kb upstream 1.0kb upstream 2031 true Scaffold202: 65885-67915 Capsella grandiflora
Cagra.0202s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold202: 66916-67915 Capsella grandiflora
Cagra.0202s0022 1.0kb downstream 1.0kb downstream 2031 true Scaffold202: 64885-66915 Capsella grandiflora
Cagra.0202s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold202: 64885-65884 Capsella grandiflora
Cagra.0202s0022 2.0kb upstream 2.0kb upstream 3031 true Scaffold202: 65885-68915 Capsella grandiflora
Cagra.0202s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold202: 66916-68915 Capsella grandiflora
Cagra.0202s0022 2.0kb downstream 2.0kb downstream 3031 true Scaffold202: 63885-66915 Capsella grandiflora
Cagra.0202s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold202: 63885-65884 Capsella grandiflora
Cagra.0202s0022 5.0kb upstream 5.0kb upstream 6031 true Scaffold202: 65885-71915 Capsella grandiflora
Cagra.0202s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold202: 66916-71915 Capsella grandiflora
Cagra.0202s0022 5.0kb downstream 5.0kb downstream 6031 true Scaffold202: 60885-66915 Capsella grandiflora
Cagra.0202s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold202: 60885-65884 Capsella grandiflora
Cagra.0202s0022 10.0kb upstream 10.0kb upstream 11031 true Scaffold202: 65885-76915 Capsella grandiflora
Cagra.0202s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold202: 66916-76915 Capsella grandiflora
Cagra.0202s0022 10.0kb downstream 10.0kb downstream 11031 true Scaffold202: 55885-66915 Capsella grandiflora
Cagra.0202s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold202: 55885-65884 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378478 5261 Brassicaceae View MSA
123837336 5264 Brassicales-Malvales View MSA
124346829 5266 SBM View MSA
124246308 5268 Malvidae View MSA
124065171 5270 Rosid View MSA
123741196 5271 Pentapetalae View MSA
122795014 5272 Eudicot View MSA
122048300 5273 Angiosperm View MSA
121310921 5274 Embryophyte View MSA
123348293 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain