Gene : Cagra.0202s0038 C. grandiflora v1.1
Defline:  (1 of 12) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  38
Name:  ? Cagra.0202s0038 Secondary Identifier:  ? PAC:28919097
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0202s0038 0.5kb upstream 0.5kb upstream 1553 true Scaffold202: 135124-136676 Capsella grandiflora
Cagra.0202s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold202: 135124-135623 Capsella grandiflora
Cagra.0202s0038 0.5kb downstream 0.5kb downstream 1553 true Scaffold202: 135624-137176 Capsella grandiflora
Cagra.0202s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold202: 136677-137176 Capsella grandiflora
Cagra.0202s0038 1.0kb upstream 1.0kb upstream 2053 true Scaffold202: 134624-136676 Capsella grandiflora
Cagra.0202s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold202: 134624-135623 Capsella grandiflora
Cagra.0202s0038 1.0kb downstream 1.0kb downstream 2053 true Scaffold202: 135624-137676 Capsella grandiflora
Cagra.0202s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold202: 136677-137676 Capsella grandiflora
Cagra.0202s0038 2.0kb upstream 2.0kb upstream 3053 true Scaffold202: 133624-136676 Capsella grandiflora
Cagra.0202s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold202: 133624-135623 Capsella grandiflora
Cagra.0202s0038 2.0kb downstream 2.0kb downstream 3053 true Scaffold202: 135624-138676 Capsella grandiflora
Cagra.0202s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold202: 136677-138676 Capsella grandiflora
Cagra.0202s0038 5.0kb upstream 5.0kb upstream 6053 true Scaffold202: 130624-136676 Capsella grandiflora
Cagra.0202s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold202: 130624-135623 Capsella grandiflora
Cagra.0202s0038 5.0kb downstream 5.0kb downstream 6053 true Scaffold202: 135624-141676 Capsella grandiflora
Cagra.0202s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold202: 136677-141676 Capsella grandiflora
Cagra.0202s0038 10.0kb upstream 10.0kb upstream 11053 true Scaffold202: 125624-136676 Capsella grandiflora
Cagra.0202s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold202: 125624-135623 Capsella grandiflora
Cagra.0202s0038 10.0kb downstream 10.0kb downstream 11053 true Scaffold202: 135624-146676 Capsella grandiflora
Cagra.0202s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold202: 136677-146676 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363342 5261 Brassicaceae View MSA
123836976 5264 Brassicales-Malvales View MSA
124346945 5266 SBM View MSA
124250644 5268 Malvidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain