Gene : Cagra.0218s0004 C. grandiflora v1.1
Defline:  (1 of 9) PTHR13833:SF16 - NHL REPEAT-CONTAINING PROTEIN Genomic Order:  4
Name:  ? Cagra.0218s0004 Secondary Identifier:  ? PAC:28901959
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0218s0004 0.5kb upstream 0.5kb upstream 953 true Scaffold218: 16793-17745 Capsella grandiflora
Cagra.0218s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold218: 17246-17745 Capsella grandiflora
Cagra.0218s0004 0.5kb downstream 0.5kb downstream 953 true Scaffold218: 16293-17245 Capsella grandiflora
Cagra.0218s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold218: 16293-16792 Capsella grandiflora
Cagra.0218s0004 1.0kb upstream 1.0kb upstream 1453 true Scaffold218: 16793-18245 Capsella grandiflora
Cagra.0218s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold218: 17246-18245 Capsella grandiflora
Cagra.0218s0004 1.0kb downstream 1.0kb downstream 1453 true Scaffold218: 15793-17245 Capsella grandiflora
Cagra.0218s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold218: 15793-16792 Capsella grandiflora
Cagra.0218s0004 2.0kb upstream 2.0kb upstream 2453 true Scaffold218: 16793-19245 Capsella grandiflora
Cagra.0218s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold218: 17246-19245 Capsella grandiflora
Cagra.0218s0004 2.0kb downstream 2.0kb downstream 2453 true Scaffold218: 14793-17245 Capsella grandiflora
Cagra.0218s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold218: 14793-16792 Capsella grandiflora
Cagra.0218s0004 5.0kb upstream 5.0kb upstream 5453 true Scaffold218: 16793-22245 Capsella grandiflora
Cagra.0218s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold218: 17246-22245 Capsella grandiflora
Cagra.0218s0004 5.0kb downstream 5.0kb downstream 5453 true Scaffold218: 11793-17245 Capsella grandiflora
Cagra.0218s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold218: 11793-16792 Capsella grandiflora
Cagra.0218s0004 10.0kb upstream 10.0kb upstream 10453 true Scaffold218: 16793-27245 Capsella grandiflora
Cagra.0218s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold218: 17246-27245 Capsella grandiflora
Cagra.0218s0004 10.0kb downstream 10.0kb downstream 10453 true Scaffold218: 6793-17245 Capsella grandiflora
Cagra.0218s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold218: 6793-16792 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124348216 5266 SBM View MSA
122366483 5261 Brassicaceae View MSA
123837861 5264 Brassicales-Malvales View MSA
124251335 5268 Malvidae View MSA
124070150 5270 Rosid View MSA
123748911 5271 Pentapetalae View MSA
122789586 5272 Eudicot View MSA
122050054 5273 Angiosperm View MSA
121311709 5274 Embryophyte View MSA
123348972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain