Gene : Cagra.2117s0024 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33264:SF5 - EXPRESSED PROTEIN-RELATED Genomic Order:  24
Name:  ? Cagra.2117s0024 Secondary Identifier:  ? PAC:28905574
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2117s0024 0.5kb upstream 0.5kb upstream 971 true Scaffold2117: 91483-92453 Capsella grandiflora
Cagra.2117s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold2117: 91954-92453 Capsella grandiflora
Cagra.2117s0024 0.5kb downstream 0.5kb downstream 971 true Scaffold2117: 90983-91953 Capsella grandiflora
Cagra.2117s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold2117: 90983-91482 Capsella grandiflora
Cagra.2117s0024 1.0kb upstream 1.0kb upstream 1471 true Scaffold2117: 91483-92953 Capsella grandiflora
Cagra.2117s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold2117: 91954-92953 Capsella grandiflora
Cagra.2117s0024 1.0kb downstream 1.0kb downstream 1471 true Scaffold2117: 90483-91953 Capsella grandiflora
Cagra.2117s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold2117: 90483-91482 Capsella grandiflora
Cagra.2117s0024 2.0kb upstream 2.0kb upstream 2471 true Scaffold2117: 91483-93953 Capsella grandiflora
Cagra.2117s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold2117: 91954-93953 Capsella grandiflora
Cagra.2117s0024 2.0kb downstream 2.0kb downstream 2471 true Scaffold2117: 89483-91953 Capsella grandiflora
Cagra.2117s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold2117: 89483-91482 Capsella grandiflora
Cagra.2117s0024 5.0kb upstream 5.0kb upstream 5471 true Scaffold2117: 91483-96953 Capsella grandiflora
Cagra.2117s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold2117: 91954-96953 Capsella grandiflora
Cagra.2117s0024 5.0kb downstream 5.0kb downstream 5471 true Scaffold2117: 86483-91953 Capsella grandiflora
Cagra.2117s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold2117: 86483-91482 Capsella grandiflora
Cagra.2117s0024 10.0kb upstream 10.0kb upstream 10471 true Scaffold2117: 91483-101953 Capsella grandiflora
Cagra.2117s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold2117: 91954-101953 Capsella grandiflora
Cagra.2117s0024 10.0kb downstream 10.0kb downstream 10471 true Scaffold2117: 81483-91953 Capsella grandiflora
Cagra.2117s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold2117: 81483-91482 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366009 5261 Brassicaceae View MSA
123799087 5264 Brassicales-Malvales View MSA
124351531 5266 SBM View MSA
124247277 5268 Malvidae View MSA
124063253 5270 Rosid View MSA
123746370 5271 Pentapetalae View MSA
122792575 5272 Eudicot View MSA
122043918 5273 Angiosperm View MSA
121310210 5274 Embryophyte View MSA
123347762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain