Gene : Cagra.2236s0047 C. grandiflora v1.1
Defline:  (1 of 2) PTHR26374:SF47 - ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN Genomic Order:  47
Name:  ? Cagra.2236s0047 Secondary Identifier:  ? PAC:28906607
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Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2236s0047 0.5kb upstream 0.5kb upstream 1244 true Scaffold2236: 164007-165250 Capsella grandiflora
Cagra.2236s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold2236: 164751-165250 Capsella grandiflora
Cagra.2236s0047 0.5kb downstream 0.5kb downstream 1244 true Scaffold2236: 163507-164750 Capsella grandiflora
Cagra.2236s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold2236: 163507-164006 Capsella grandiflora
Cagra.2236s0047 1.0kb upstream 1.0kb upstream 1744 true Scaffold2236: 164007-165750 Capsella grandiflora
Cagra.2236s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold2236: 164751-165750 Capsella grandiflora
Cagra.2236s0047 1.0kb downstream 1.0kb downstream 1744 true Scaffold2236: 163007-164750 Capsella grandiflora
Cagra.2236s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold2236: 163007-164006 Capsella grandiflora
Cagra.2236s0047 2.0kb upstream 2.0kb upstream 2744 true Scaffold2236: 164007-166750 Capsella grandiflora
Cagra.2236s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold2236: 164751-166750 Capsella grandiflora
Cagra.2236s0047 2.0kb downstream 2.0kb downstream 2744 true Scaffold2236: 162007-164750 Capsella grandiflora
Cagra.2236s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold2236: 162007-164006 Capsella grandiflora
Cagra.2236s0047 5.0kb upstream 5.0kb upstream 5744 true Scaffold2236: 164007-169750 Capsella grandiflora
Cagra.2236s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold2236: 164751-169750 Capsella grandiflora
Cagra.2236s0047 5.0kb downstream 5.0kb downstream 5744 true Scaffold2236: 159007-164750 Capsella grandiflora
Cagra.2236s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold2236: 159007-164006 Capsella grandiflora
Cagra.2236s0047 10.0kb upstream 10.0kb upstream 8034 true Scaffold2236: 164007-172040 Capsella grandiflora
Cagra.2236s0047 10.0kb upstream 10.0kb upstream 7290 false Scaffold2236: 164751-172040 Capsella grandiflora
Cagra.2236s0047 10.0kb downstream 10.0kb downstream 10744 true Scaffold2236: 154007-164750 Capsella grandiflora
Cagra.2236s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold2236: 154007-164006 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373731 5261 Brassicaceae View MSA
123837110 5264 Brassicales-Malvales View MSA
124322243 5266 SBM View MSA
124249999 5268 Malvidae View MSA
124040372 5270 Rosid View MSA
123745772 5271 Pentapetalae View MSA
122771644 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain