Gene : Cagra.2238s0047 C. grandiflora v1.1
Defline:  (1 of 5) PF07647 - SAM domain (Sterile alpha motif) (SAM_2) Genomic Order:  47
Name:  ? Cagra.2238s0047 Secondary Identifier:  ? PAC:28918211
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2238s0047 0.5kb upstream 0.5kb upstream 1118 true Scaffold2238: 138535-139652 Capsella grandiflora
Cagra.2238s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold2238: 139153-139652 Capsella grandiflora
Cagra.2238s0047 0.5kb downstream 0.5kb downstream 1118 true Scaffold2238: 138035-139152 Capsella grandiflora
Cagra.2238s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold2238: 138035-138534 Capsella grandiflora
Cagra.2238s0047 1.0kb upstream 1.0kb upstream 1618 true Scaffold2238: 138535-140152 Capsella grandiflora
Cagra.2238s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold2238: 139153-140152 Capsella grandiflora
Cagra.2238s0047 1.0kb downstream 1.0kb downstream 1618 true Scaffold2238: 137535-139152 Capsella grandiflora
Cagra.2238s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold2238: 137535-138534 Capsella grandiflora
Cagra.2238s0047 2.0kb upstream 2.0kb upstream 2618 true Scaffold2238: 138535-141152 Capsella grandiflora
Cagra.2238s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold2238: 139153-141152 Capsella grandiflora
Cagra.2238s0047 2.0kb downstream 2.0kb downstream 2618 true Scaffold2238: 136535-139152 Capsella grandiflora
Cagra.2238s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold2238: 136535-138534 Capsella grandiflora
Cagra.2238s0047 5.0kb upstream 5.0kb upstream 5618 true Scaffold2238: 138535-144152 Capsella grandiflora
Cagra.2238s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold2238: 139153-144152 Capsella grandiflora
Cagra.2238s0047 5.0kb downstream 5.0kb downstream 5618 true Scaffold2238: 133535-139152 Capsella grandiflora
Cagra.2238s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold2238: 133535-138534 Capsella grandiflora
Cagra.2238s0047 10.0kb upstream 10.0kb upstream 10618 true Scaffold2238: 138535-149152 Capsella grandiflora
Cagra.2238s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold2238: 139153-149152 Capsella grandiflora
Cagra.2238s0047 10.0kb downstream 10.0kb downstream 10618 true Scaffold2238: 128535-139152 Capsella grandiflora
Cagra.2238s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold2238: 128535-138534 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361786 5261 Brassicaceae View MSA
123839675 5264 Brassicales-Malvales View MSA
124344189 5266 SBM View MSA
124242329 5268 Malvidae View MSA
124063066 5270 Rosid View MSA
123745428 5271 Pentapetalae View MSA
122789154 5272 Eudicot View MSA
122048035 5273 Angiosperm View MSA
121310835 5274 Embryophyte View MSA
123348222 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain