Gene : Cagra.2231s0004 C. grandiflora v1.1

Defline:  (1 of 3) PTHR10891:SF605 - CALCIUM-BINDING PROTEIN CML25-RELATED Genomic Order:  4
Name:  ? Cagra.2231s0004 Secondary Identifier:  ? PAC:28900280

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2231s0004 0.5kb upstream 0.5kb upstream 1055 true Scaffold2231: 9829-10883 Capsella grandiflora
Cagra.2231s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold2231: 10384-10883 Capsella grandiflora
Cagra.2231s0004 0.5kb downstream 0.5kb downstream 1055 true Scaffold2231: 9329-10383 Capsella grandiflora
Cagra.2231s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold2231: 9329-9828 Capsella grandiflora
Cagra.2231s0004 1.0kb upstream 1.0kb upstream 1555 true Scaffold2231: 9829-11383 Capsella grandiflora
Cagra.2231s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold2231: 10384-11383 Capsella grandiflora
Cagra.2231s0004 1.0kb downstream 1.0kb downstream 1555 true Scaffold2231: 8829-10383 Capsella grandiflora
Cagra.2231s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold2231: 8829-9828 Capsella grandiflora
Cagra.2231s0004 2.0kb upstream 2.0kb upstream 2555 true Scaffold2231: 9829-12383 Capsella grandiflora
Cagra.2231s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold2231: 10384-12383 Capsella grandiflora
Cagra.2231s0004 2.0kb downstream 2.0kb downstream 2555 true Scaffold2231: 7829-10383 Capsella grandiflora
Cagra.2231s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold2231: 7829-9828 Capsella grandiflora
Cagra.2231s0004 5.0kb upstream 5.0kb upstream 5555 true Scaffold2231: 9829-15383 Capsella grandiflora
Cagra.2231s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold2231: 10384-15383 Capsella grandiflora
Cagra.2231s0004 5.0kb downstream 5.0kb downstream 5555 true Scaffold2231: 4829-10383 Capsella grandiflora
Cagra.2231s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold2231: 4829-9828 Capsella grandiflora
Cagra.2231s0004 10.0kb upstream 10.0kb upstream 10555 true Scaffold2231: 9829-20383 Capsella grandiflora
Cagra.2231s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold2231: 10384-20383 Capsella grandiflora
Cagra.2231s0004 10.0kb downstream 10.0kb downstream 10383 true Scaffold2231: 1-10383 Capsella grandiflora
Cagra.2231s0004 10.0kb downstream 10.0kb downstream 9828 false Scaffold2231: 1-9828 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374449 5261 Brassicaceae View MSA
123836378 5264 Brassicales-Malvales View MSA
124322155 5266 SBM View MSA
124253055 5268 Malvidae View MSA
124050277 5270 Rosid View MSA
123736874 5271 Pentapetalae View MSA
122791196 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain