Gene : Cagra.2192s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31852:SF7 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  8
Name:  ? Cagra.2192s0008 Secondary Identifier:  ? PAC:28907211
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2192s0008 0.5kb upstream 0.5kb upstream 1061 true Scaffold2192: 47590-48650 Capsella grandiflora
Cagra.2192s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold2192: 48151-48650 Capsella grandiflora
Cagra.2192s0008 0.5kb downstream 0.5kb downstream 1061 true Scaffold2192: 47090-48150 Capsella grandiflora
Cagra.2192s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold2192: 47090-47589 Capsella grandiflora
Cagra.2192s0008 1.0kb upstream 1.0kb upstream 1561 true Scaffold2192: 47590-49150 Capsella grandiflora
Cagra.2192s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold2192: 48151-49150 Capsella grandiflora
Cagra.2192s0008 1.0kb downstream 1.0kb downstream 1561 true Scaffold2192: 46590-48150 Capsella grandiflora
Cagra.2192s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold2192: 46590-47589 Capsella grandiflora
Cagra.2192s0008 2.0kb upstream 2.0kb upstream 2561 true Scaffold2192: 47590-50150 Capsella grandiflora
Cagra.2192s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold2192: 48151-50150 Capsella grandiflora
Cagra.2192s0008 2.0kb downstream 2.0kb downstream 2561 true Scaffold2192: 45590-48150 Capsella grandiflora
Cagra.2192s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold2192: 45590-47589 Capsella grandiflora
Cagra.2192s0008 5.0kb upstream 5.0kb upstream 5561 true Scaffold2192: 47590-53150 Capsella grandiflora
Cagra.2192s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold2192: 48151-53150 Capsella grandiflora
Cagra.2192s0008 5.0kb downstream 5.0kb downstream 5561 true Scaffold2192: 42590-48150 Capsella grandiflora
Cagra.2192s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold2192: 42590-47589 Capsella grandiflora
Cagra.2192s0008 10.0kb upstream 10.0kb upstream 10561 true Scaffold2192: 47590-58150 Capsella grandiflora
Cagra.2192s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold2192: 48151-58150 Capsella grandiflora
Cagra.2192s0008 10.0kb downstream 10.0kb downstream 10561 true Scaffold2192: 37590-48150 Capsella grandiflora
Cagra.2192s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold2192: 37590-47589 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367054 5261 Brassicaceae View MSA
123834612 5264 Brassicales-Malvales View MSA
124345414 5266 SBM View MSA
124239216 5268 Malvidae View MSA
124065913 5270 Rosid View MSA
123751037 5271 Pentapetalae View MSA
122791768 5272 Eudicot View MSA
122047414 5273 Angiosperm View MSA
121346777 5274 Embryophyte View MSA
123380442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain