Gene : Cagra.2350s0020 C. grandiflora v1.1
Defline:  (1 of 1) 1.13.12.1 - Arginine 2-monooxygenase / Arginine oxygenase (decarboxylating) Genomic Order:  20
Name:  ? Cagra.2350s0020 Secondary Identifier:  ? PAC:28908818
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ARGDEG-V-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-43 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2350s0020 0.5kb upstream 0.5kb upstream 2657 true Scaffold2350: 64705-67361 Capsella grandiflora
Cagra.2350s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold2350: 66862-67361 Capsella grandiflora
Cagra.2350s0020 0.5kb downstream 0.5kb downstream 2657 true Scaffold2350: 64205-66861 Capsella grandiflora
Cagra.2350s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold2350: 64205-64704 Capsella grandiflora
Cagra.2350s0020 1.0kb upstream 1.0kb upstream 3157 true Scaffold2350: 64705-67861 Capsella grandiflora
Cagra.2350s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold2350: 66862-67861 Capsella grandiflora
Cagra.2350s0020 1.0kb downstream 1.0kb downstream 3157 true Scaffold2350: 63705-66861 Capsella grandiflora
Cagra.2350s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold2350: 63705-64704 Capsella grandiflora
Cagra.2350s0020 2.0kb upstream 2.0kb upstream 4157 true Scaffold2350: 64705-68861 Capsella grandiflora
Cagra.2350s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold2350: 66862-68861 Capsella grandiflora
Cagra.2350s0020 2.0kb downstream 2.0kb downstream 4157 true Scaffold2350: 62705-66861 Capsella grandiflora
Cagra.2350s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold2350: 62705-64704 Capsella grandiflora
Cagra.2350s0020 5.0kb upstream 5.0kb upstream 7157 true Scaffold2350: 64705-71861 Capsella grandiflora
Cagra.2350s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold2350: 66862-71861 Capsella grandiflora
Cagra.2350s0020 5.0kb downstream 5.0kb downstream 7157 true Scaffold2350: 59705-66861 Capsella grandiflora
Cagra.2350s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold2350: 59705-64704 Capsella grandiflora
Cagra.2350s0020 10.0kb upstream 10.0kb upstream 12157 true Scaffold2350: 64705-76861 Capsella grandiflora
Cagra.2350s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold2350: 66862-76861 Capsella grandiflora
Cagra.2350s0020 10.0kb downstream 10.0kb downstream 12157 true Scaffold2350: 54705-66861 Capsella grandiflora
Cagra.2350s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold2350: 54705-64704 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369199 5261 Brassicaceae View MSA
123827460 5264 Brassicales-Malvales View MSA
124337522 5266 SBM View MSA
124242922 5268 Malvidae View MSA
124064588 5270 Rosid View MSA
123739718 5271 Pentapetalae View MSA
122791004 5272 Eudicot View MSA
122046464 5273 Angiosperm View MSA
121350786 5274 Embryophyte View MSA
123424715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain