Gene : Cagra.0228s0016 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21236:SF8 - INTEGRAL MEMBRANE YIP1 FAMILY PROTEIN Genomic Order:  16
Name:  ? Cagra.0228s0016 Secondary Identifier:  ? PAC:28914705
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0228s0016 0.5kb upstream 0.5kb upstream 1609 true Scaffold228: 47780-49388 Capsella grandiflora
Cagra.0228s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold228: 48889-49388 Capsella grandiflora
Cagra.0228s0016 0.5kb downstream 0.5kb downstream 1609 true Scaffold228: 47280-48888 Capsella grandiflora
Cagra.0228s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold228: 47280-47779 Capsella grandiflora
Cagra.0228s0016 1.0kb upstream 1.0kb upstream 2109 true Scaffold228: 47780-49888 Capsella grandiflora
Cagra.0228s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold228: 48889-49888 Capsella grandiflora
Cagra.0228s0016 1.0kb downstream 1.0kb downstream 2109 true Scaffold228: 46780-48888 Capsella grandiflora
Cagra.0228s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold228: 46780-47779 Capsella grandiflora
Cagra.0228s0016 2.0kb upstream 2.0kb upstream 3109 true Scaffold228: 47780-50888 Capsella grandiflora
Cagra.0228s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold228: 48889-50888 Capsella grandiflora
Cagra.0228s0016 2.0kb downstream 2.0kb downstream 3109 true Scaffold228: 45780-48888 Capsella grandiflora
Cagra.0228s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold228: 45780-47779 Capsella grandiflora
Cagra.0228s0016 5.0kb upstream 5.0kb upstream 6109 true Scaffold228: 47780-53888 Capsella grandiflora
Cagra.0228s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold228: 48889-53888 Capsella grandiflora
Cagra.0228s0016 5.0kb downstream 5.0kb downstream 6109 true Scaffold228: 42780-48888 Capsella grandiflora
Cagra.0228s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold228: 42780-47779 Capsella grandiflora
Cagra.0228s0016 10.0kb upstream 10.0kb upstream 11109 true Scaffold228: 47780-58888 Capsella grandiflora
Cagra.0228s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold228: 48889-58888 Capsella grandiflora
Cagra.0228s0016 10.0kb downstream 10.0kb downstream 11109 true Scaffold228: 37780-48888 Capsella grandiflora
Cagra.0228s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold228: 37780-47779 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372175 5261 Brassicaceae View MSA
123841173 5264 Brassicales-Malvales View MSA
124339773 5266 SBM View MSA
124237053 5268 Malvidae View MSA
124071783 5270 Rosid View MSA
123751482 5271 Pentapetalae View MSA
122787116 5272 Eudicot View MSA
122046635 5273 Angiosperm View MSA
121346620 5274 Embryophyte View MSA
123427417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain