Gene : Cagra.2281s0028 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33921:SF3 - CALVIN CYCLE PROTEIN CP12-3, CHLOROPLASTIC Genomic Order:  28
Name:  ? Cagra.2281s0028 Secondary Identifier:  ? PAC:28911087
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2281s0028 0.5kb upstream 0.5kb upstream 1100 true Scaffold2281: 105309-106408 Capsella grandiflora
Cagra.2281s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold2281: 105909-106408 Capsella grandiflora
Cagra.2281s0028 0.5kb downstream 0.5kb downstream 1100 true Scaffold2281: 104809-105908 Capsella grandiflora
Cagra.2281s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold2281: 104809-105308 Capsella grandiflora
Cagra.2281s0028 1.0kb upstream 1.0kb upstream 1600 true Scaffold2281: 105309-106908 Capsella grandiflora
Cagra.2281s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold2281: 105909-106908 Capsella grandiflora
Cagra.2281s0028 1.0kb downstream 1.0kb downstream 1600 true Scaffold2281: 104309-105908 Capsella grandiflora
Cagra.2281s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold2281: 104309-105308 Capsella grandiflora
Cagra.2281s0028 2.0kb upstream 2.0kb upstream 2600 true Scaffold2281: 105309-107908 Capsella grandiflora
Cagra.2281s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold2281: 105909-107908 Capsella grandiflora
Cagra.2281s0028 2.0kb downstream 2.0kb downstream 2600 true Scaffold2281: 103309-105908 Capsella grandiflora
Cagra.2281s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold2281: 103309-105308 Capsella grandiflora
Cagra.2281s0028 5.0kb upstream 5.0kb upstream 5600 true Scaffold2281: 105309-110908 Capsella grandiflora
Cagra.2281s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold2281: 105909-110908 Capsella grandiflora
Cagra.2281s0028 5.0kb downstream 5.0kb downstream 5600 true Scaffold2281: 100309-105908 Capsella grandiflora
Cagra.2281s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold2281: 100309-105308 Capsella grandiflora
Cagra.2281s0028 10.0kb upstream 10.0kb upstream 10600 true Scaffold2281: 105309-115908 Capsella grandiflora
Cagra.2281s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold2281: 105909-115908 Capsella grandiflora
Cagra.2281s0028 10.0kb downstream 10.0kb downstream 10600 true Scaffold2281: 95309-105908 Capsella grandiflora
Cagra.2281s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold2281: 95309-105308 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360808 5261 Brassicaceae View MSA
123829669 5264 Brassicales-Malvales View MSA
124347812 5266 SBM View MSA
124254040 5268 Malvidae View MSA
124070241 5270 Rosid View MSA
123742696 5271 Pentapetalae View MSA
122795504 5272 Eudicot View MSA
122046618 5273 Angiosperm View MSA
121351753 5274 Embryophyte View MSA
123424034 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain