Gene : Cagra.2420s0003 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10497 - 60S RIBOSOMAL PROTEIN L27 Genomic Order:  3
Name:  ? Cagra.2420s0003 Secondary Identifier:  ? PAC:28897158
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Ontology Annotation Displayer

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Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2420s0003 0.5kb upstream 0.5kb upstream 1082 true Scaffold2420: 6586-7667 Capsella grandiflora
Cagra.2420s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2420: 6586-7085 Capsella grandiflora
Cagra.2420s0003 0.5kb downstream 0.5kb downstream 1082 true Scaffold2420: 7086-8167 Capsella grandiflora
Cagra.2420s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2420: 7668-8167 Capsella grandiflora
Cagra.2420s0003 1.0kb upstream 1.0kb upstream 1582 true Scaffold2420: 6086-7667 Capsella grandiflora
Cagra.2420s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2420: 6086-7085 Capsella grandiflora
Cagra.2420s0003 1.0kb downstream 1.0kb downstream 1582 true Scaffold2420: 7086-8667 Capsella grandiflora
Cagra.2420s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2420: 7668-8667 Capsella grandiflora
Cagra.2420s0003 2.0kb upstream 2.0kb upstream 2582 true Scaffold2420: 5086-7667 Capsella grandiflora
Cagra.2420s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2420: 5086-7085 Capsella grandiflora
Cagra.2420s0003 2.0kb downstream 2.0kb downstream 2582 true Scaffold2420: 7086-9667 Capsella grandiflora
Cagra.2420s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2420: 7668-9667 Capsella grandiflora
Cagra.2420s0003 5.0kb upstream 5.0kb upstream 5582 true Scaffold2420: 2086-7667 Capsella grandiflora
Cagra.2420s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2420: 2086-7085 Capsella grandiflora
Cagra.2420s0003 5.0kb downstream 5.0kb downstream 5582 true Scaffold2420: 7086-12667 Capsella grandiflora
Cagra.2420s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2420: 7668-12667 Capsella grandiflora
Cagra.2420s0003 10.0kb upstream 10.0kb upstream 7667 true Scaffold2420: 1-7667 Capsella grandiflora
Cagra.2420s0003 10.0kb upstream 10.0kb upstream 7085 false Scaffold2420: 1-7085 Capsella grandiflora
Cagra.2420s0003 10.0kb downstream 10.0kb downstream 10582 true Scaffold2420: 7086-17667 Capsella grandiflora
Cagra.2420s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold2420: 7668-17667 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343830 5261 Brassicaceae View MSA
123783925 5264 Brassicales-Malvales View MSA
124282131 5266 SBM View MSA
124254119 5268 Malvidae View MSA
124065262 5270 Rosid View MSA
123741736 5271 Pentapetalae View MSA
122786015 5272 Eudicot View MSA
122045020 5273 Angiosperm View MSA
121345737 5274 Embryophyte View MSA
123427909 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain