Gene : Cagra.2428s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12565:SF74 - TRANSCRIPTION FACTOR HEC1 Genomic Order:  3
Name:  ? Cagra.2428s0003 Secondary Identifier:  ? PAC:28904726
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2428s0003 0.5kb upstream 0.5kb upstream 1229 true Scaffold2428: 13015-14243 Capsella grandiflora
Cagra.2428s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2428: 13015-13514 Capsella grandiflora
Cagra.2428s0003 0.5kb downstream 0.5kb downstream 1229 true Scaffold2428: 13515-14743 Capsella grandiflora
Cagra.2428s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2428: 14244-14743 Capsella grandiflora
Cagra.2428s0003 1.0kb upstream 1.0kb upstream 1729 true Scaffold2428: 12515-14243 Capsella grandiflora
Cagra.2428s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2428: 12515-13514 Capsella grandiflora
Cagra.2428s0003 1.0kb downstream 1.0kb downstream 1729 true Scaffold2428: 13515-15243 Capsella grandiflora
Cagra.2428s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2428: 14244-15243 Capsella grandiflora
Cagra.2428s0003 2.0kb upstream 2.0kb upstream 2729 true Scaffold2428: 11515-14243 Capsella grandiflora
Cagra.2428s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2428: 11515-13514 Capsella grandiflora
Cagra.2428s0003 2.0kb downstream 2.0kb downstream 2729 true Scaffold2428: 13515-16243 Capsella grandiflora
Cagra.2428s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2428: 14244-16243 Capsella grandiflora
Cagra.2428s0003 5.0kb upstream 5.0kb upstream 5729 true Scaffold2428: 8515-14243 Capsella grandiflora
Cagra.2428s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2428: 8515-13514 Capsella grandiflora
Cagra.2428s0003 5.0kb downstream 5.0kb downstream 5729 true Scaffold2428: 13515-19243 Capsella grandiflora
Cagra.2428s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2428: 14244-19243 Capsella grandiflora
Cagra.2428s0003 10.0kb upstream 10.0kb upstream 10729 true Scaffold2428: 3515-14243 Capsella grandiflora
Cagra.2428s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold2428: 3515-13514 Capsella grandiflora
Cagra.2428s0003 10.0kb downstream 10.0kb downstream 10729 true Scaffold2428: 13515-24243 Capsella grandiflora
Cagra.2428s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold2428: 14244-24243 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366012 5261 Brassicaceae View MSA
123837736 5264 Brassicales-Malvales View MSA
124350383 5266 SBM View MSA
124250607 5268 Malvidae View MSA
124070327 5270 Rosid View MSA
123745456 5271 Pentapetalae View MSA
122795730 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain