Gene : Cagra.0239s0022 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31307:SF3 - ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE PROTEIN Genomic Order:  22
Name:  ? Cagra.0239s0022 Secondary Identifier:  ? PAC:28915438
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0239s0022 0.5kb upstream 0.5kb upstream 1691 true Scaffold239: 58520-60210 Capsella grandiflora
Cagra.0239s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold239: 59711-60210 Capsella grandiflora
Cagra.0239s0022 0.5kb downstream 0.5kb downstream 1691 true Scaffold239: 58020-59710 Capsella grandiflora
Cagra.0239s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold239: 58020-58519 Capsella grandiflora
Cagra.0239s0022 1.0kb upstream 1.0kb upstream 2191 true Scaffold239: 58520-60710 Capsella grandiflora
Cagra.0239s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold239: 59711-60710 Capsella grandiflora
Cagra.0239s0022 1.0kb downstream 1.0kb downstream 2191 true Scaffold239: 57520-59710 Capsella grandiflora
Cagra.0239s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold239: 57520-58519 Capsella grandiflora
Cagra.0239s0022 2.0kb upstream 2.0kb upstream 3191 true Scaffold239: 58520-61710 Capsella grandiflora
Cagra.0239s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold239: 59711-61710 Capsella grandiflora
Cagra.0239s0022 2.0kb downstream 2.0kb downstream 3191 true Scaffold239: 56520-59710 Capsella grandiflora
Cagra.0239s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold239: 56520-58519 Capsella grandiflora
Cagra.0239s0022 5.0kb upstream 5.0kb upstream 6191 true Scaffold239: 58520-64710 Capsella grandiflora
Cagra.0239s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold239: 59711-64710 Capsella grandiflora
Cagra.0239s0022 5.0kb downstream 5.0kb downstream 6191 true Scaffold239: 53520-59710 Capsella grandiflora
Cagra.0239s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold239: 53520-58519 Capsella grandiflora
Cagra.0239s0022 10.0kb upstream 10.0kb upstream 11191 true Scaffold239: 58520-69710 Capsella grandiflora
Cagra.0239s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold239: 59711-69710 Capsella grandiflora
Cagra.0239s0022 10.0kb downstream 10.0kb downstream 11191 true Scaffold239: 48520-59710 Capsella grandiflora
Cagra.0239s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold239: 48520-58519 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370961 5261 Brassicaceae View MSA
123830764 5264 Brassicales-Malvales View MSA
124339418 5266 SBM View MSA
124251830 5268 Malvidae View MSA
124069508 5270 Rosid View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain