Protein : Cagra.0239s0075.1.p C. grandiflora v1.1
Secondary Identifier:  PAC:28915432 Organism Name:  Capsella grandiflora
Length:  510   Name:  Cagra.0239s0075.1.p
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SummaryProteinsOther
 
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SummaryProteinsOther
 

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Proteins

5 Protein Domains

DB identifier Type Name
IPR000070 Domain Pectinesterase, catalytic
IPR012334 Domain Pectin lyase fold
IPR011050 Domain Pectin lyase fold/virulence factor
IPR006501 Domain Pectinesterase inhibitor domain
IPR006633 Domain Carbohydrate-binding/sugar hydrolysis domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Cagra.0239s0075.1_CDS 1533   Scaffold239: 271186-273359 Capsella grandiflora

22 Ontology Annotations

Ontology Term Db Gene/Protein Name
GO:0004857 GO Cagra.0239s0075.1.p
G3DSA:2.160.20.10 GENE3D Cagra.0239s0075.1.p
3.1.1.11 ENZYME Cagra.0239s0075.1.p
IPR000070 InterPro Cagra.0239s0075.1.p
GO:0042545 GO Cagra.0239s0075.1.p
GO:0030599 GO Cagra.0239s0075.1.p
GO:0005618 GO Cagra.0239s0075.1.p
IPR011050 InterPro Cagra.0239s0075.1.p
IPR006633 InterPro Cagra.0239s0075.1.p
IPR006501 InterPro Cagra.0239s0075.1.p
PTHR31707 PANTHER Cagra.0239s0075.1.p
PECTINESTERASE-RXN METACYC Cagra.0239s0075.1.p
K01051 KEGG Cagra.0239s0075.1.p
IPR012334 InterPro Cagra.0239s0075.1.p
PF04043 PFAM Cagra.0239s0075.1.p
PF01095 PFAM Cagra.0239s0075.1.p
PWY-1081 Pathway Cagra.0239s0075.1.p
PTHR31707:SF11 PANTHER Cagra.0239s0075.1.p
TIGR01614 TIGRFAMs Cagra.0239s0075.1.p
SSF51126 SSF Cagra.0239s0075.1.p
SSF101148 SSF Cagra.0239s0075.1.p
SM00722 SMART Cagra.0239s0075.1.p

1 Pathway Components

Type Key Level Step
      6

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1081 Capsella grandiflora pathologic