Gene : Cagra.2350s0089 C. grandiflora v1.1
Defline:  (1 of 7) PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATED Genomic Order:  89
Name:  ? Cagra.2350s0089 Secondary Identifier:  ? PAC:28908722
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2350s0089 0.5kb upstream 0.5kb upstream 1100 true Scaffold2350: 342480-343579 Capsella grandiflora
Cagra.2350s0089 0.5kb upstream 0.5kb upstream 500 false Scaffold2350: 343080-343579 Capsella grandiflora
Cagra.2350s0089 0.5kb downstream 0.5kb downstream 1100 true Scaffold2350: 341980-343079 Capsella grandiflora
Cagra.2350s0089 0.5kb downstream 0.5kb downstream 500 false Scaffold2350: 341980-342479 Capsella grandiflora
Cagra.2350s0089 1.0kb upstream 1.0kb upstream 1600 true Scaffold2350: 342480-344079 Capsella grandiflora
Cagra.2350s0089 1.0kb upstream 1.0kb upstream 1000 false Scaffold2350: 343080-344079 Capsella grandiflora
Cagra.2350s0089 1.0kb downstream 1.0kb downstream 1600 true Scaffold2350: 341480-343079 Capsella grandiflora
Cagra.2350s0089 1.0kb downstream 1.0kb downstream 1000 false Scaffold2350: 341480-342479 Capsella grandiflora
Cagra.2350s0089 2.0kb upstream 2.0kb upstream 2600 true Scaffold2350: 342480-345079 Capsella grandiflora
Cagra.2350s0089 2.0kb upstream 2.0kb upstream 2000 false Scaffold2350: 343080-345079 Capsella grandiflora
Cagra.2350s0089 2.0kb downstream 2.0kb downstream 2600 true Scaffold2350: 340480-343079 Capsella grandiflora
Cagra.2350s0089 2.0kb downstream 2.0kb downstream 2000 false Scaffold2350: 340480-342479 Capsella grandiflora
Cagra.2350s0089 5.0kb upstream 5.0kb upstream 5600 true Scaffold2350: 342480-348079 Capsella grandiflora
Cagra.2350s0089 5.0kb upstream 5.0kb upstream 5000 false Scaffold2350: 343080-348079 Capsella grandiflora
Cagra.2350s0089 5.0kb downstream 5.0kb downstream 5600 true Scaffold2350: 337480-343079 Capsella grandiflora
Cagra.2350s0089 5.0kb downstream 5.0kb downstream 5000 false Scaffold2350: 337480-342479 Capsella grandiflora
Cagra.2350s0089 10.0kb upstream 10.0kb upstream 10600 true Scaffold2350: 342480-353079 Capsella grandiflora
Cagra.2350s0089 10.0kb upstream 10.0kb upstream 10000 false Scaffold2350: 343080-353079 Capsella grandiflora
Cagra.2350s0089 10.0kb downstream 10.0kb downstream 10600 true Scaffold2350: 332480-343079 Capsella grandiflora
Cagra.2350s0089 10.0kb downstream 10.0kb downstream 10000 false Scaffold2350: 332480-342479 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374963 5261 Brassicaceae View MSA
123800857 5264 Brassicales-Malvales View MSA
124298221 5266 SBM View MSA
124250738 5268 Malvidae View MSA
124070863 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain