Gene : Cagra.2350s0082 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31100:SF16 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 25 Genomic Order:  82
Name:  ? Cagra.2350s0082 Secondary Identifier:  ? PAC:28908824
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2350s0082 0.5kb upstream 0.5kb upstream 1388 true Scaffold2350: 318870-320257 Capsella grandiflora
Cagra.2350s0082 0.5kb upstream 0.5kb upstream 500 false Scaffold2350: 318870-319369 Capsella grandiflora
Cagra.2350s0082 0.5kb downstream 0.5kb downstream 1388 true Scaffold2350: 319370-320757 Capsella grandiflora
Cagra.2350s0082 0.5kb downstream 0.5kb downstream 500 false Scaffold2350: 320258-320757 Capsella grandiflora
Cagra.2350s0082 1.0kb upstream 1.0kb upstream 1888 true Scaffold2350: 318370-320257 Capsella grandiflora
Cagra.2350s0082 1.0kb upstream 1.0kb upstream 1000 false Scaffold2350: 318370-319369 Capsella grandiflora
Cagra.2350s0082 1.0kb downstream 1.0kb downstream 1888 true Scaffold2350: 319370-321257 Capsella grandiflora
Cagra.2350s0082 1.0kb downstream 1.0kb downstream 1000 false Scaffold2350: 320258-321257 Capsella grandiflora
Cagra.2350s0082 2.0kb upstream 2.0kb upstream 2888 true Scaffold2350: 317370-320257 Capsella grandiflora
Cagra.2350s0082 2.0kb upstream 2.0kb upstream 2000 false Scaffold2350: 317370-319369 Capsella grandiflora
Cagra.2350s0082 2.0kb downstream 2.0kb downstream 2888 true Scaffold2350: 319370-322257 Capsella grandiflora
Cagra.2350s0082 2.0kb downstream 2.0kb downstream 2000 false Scaffold2350: 320258-322257 Capsella grandiflora
Cagra.2350s0082 5.0kb upstream 5.0kb upstream 5888 true Scaffold2350: 314370-320257 Capsella grandiflora
Cagra.2350s0082 5.0kb upstream 5.0kb upstream 5000 false Scaffold2350: 314370-319369 Capsella grandiflora
Cagra.2350s0082 5.0kb downstream 5.0kb downstream 5888 true Scaffold2350: 319370-325257 Capsella grandiflora
Cagra.2350s0082 5.0kb downstream 5.0kb downstream 5000 false Scaffold2350: 320258-325257 Capsella grandiflora
Cagra.2350s0082 10.0kb upstream 10.0kb upstream 10888 true Scaffold2350: 309370-320257 Capsella grandiflora
Cagra.2350s0082 10.0kb upstream 10.0kb upstream 10000 false Scaffold2350: 309370-319369 Capsella grandiflora
Cagra.2350s0082 10.0kb downstream 10.0kb downstream 10888 true Scaffold2350: 319370-330257 Capsella grandiflora
Cagra.2350s0082 10.0kb downstream 10.0kb downstream 10000 false Scaffold2350: 320258-330257 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372963 5261 Brassicaceae View MSA
123835594 5264 Brassicales-Malvales View MSA
124343869 5266 SBM View MSA
124244739 5268 Malvidae View MSA
124072803 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain