Gene : Cagra.23565s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11145 - TUMOR NECROSIS FACTOR-RELATED Genomic Order:  9
Name:  ? Cagra.23565s0009 Secondary Identifier:  ? PAC:28904460
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.23565s0009 0.5kb upstream 0.5kb upstream 2366 true Scaffold23565: 28316-30681 Capsella grandiflora
Cagra.23565s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold23565: 28316-28815 Capsella grandiflora
Cagra.23565s0009 0.5kb downstream 0.5kb downstream 2366 true Scaffold23565: 28816-31181 Capsella grandiflora
Cagra.23565s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold23565: 30682-31181 Capsella grandiflora
Cagra.23565s0009 1.0kb upstream 1.0kb upstream 2866 true Scaffold23565: 27816-30681 Capsella grandiflora
Cagra.23565s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold23565: 27816-28815 Capsella grandiflora
Cagra.23565s0009 1.0kb downstream 1.0kb downstream 2866 true Scaffold23565: 28816-31681 Capsella grandiflora
Cagra.23565s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold23565: 30682-31681 Capsella grandiflora
Cagra.23565s0009 2.0kb upstream 2.0kb upstream 3866 true Scaffold23565: 26816-30681 Capsella grandiflora
Cagra.23565s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold23565: 26816-28815 Capsella grandiflora
Cagra.23565s0009 2.0kb downstream 2.0kb downstream 3866 true Scaffold23565: 28816-32681 Capsella grandiflora
Cagra.23565s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold23565: 30682-32681 Capsella grandiflora
Cagra.23565s0009 5.0kb upstream 5.0kb upstream 6866 true Scaffold23565: 23816-30681 Capsella grandiflora
Cagra.23565s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold23565: 23816-28815 Capsella grandiflora
Cagra.23565s0009 5.0kb downstream 5.0kb downstream 6866 true Scaffold23565: 28816-35681 Capsella grandiflora
Cagra.23565s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold23565: 30682-35681 Capsella grandiflora
Cagra.23565s0009 10.0kb upstream 10.0kb upstream 11866 true Scaffold23565: 18816-30681 Capsella grandiflora
Cagra.23565s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold23565: 18816-28815 Capsella grandiflora
Cagra.23565s0009 10.0kb downstream 10.0kb downstream 11313 true Scaffold23565: 28816-40128 Capsella grandiflora
Cagra.23565s0009 10.0kb downstream 10.0kb downstream 9447 false Scaffold23565: 30682-40128 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363702 5261 Brassicaceae View MSA
123834596 5264 Brassicales-Malvales View MSA
124339731 5266 SBM View MSA
124241759 5268 Malvidae View MSA
124065246 5270 Rosid View MSA
123739700 5271 Pentapetalae View MSA
122793566 5272 Eudicot View MSA
122045372 5273 Angiosperm View MSA
121348328 5274 Embryophyte View MSA
123380822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain