Gene : Cagra.0248s0107 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31279:SF12 - PHI-1-LIKE PROTEIN Genomic Order:  107
Name:  ? Cagra.0248s0107 Secondary Identifier:  ? PAC:28918919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0248s0107 0.5kb upstream 0.5kb upstream 1746 true Scaffold248: 381088-382833 Capsella grandiflora
Cagra.0248s0107 0.5kb upstream 0.5kb upstream 500 false Scaffold248: 381088-381587 Capsella grandiflora
Cagra.0248s0107 0.5kb downstream 0.5kb downstream 1746 true Scaffold248: 381588-383333 Capsella grandiflora
Cagra.0248s0107 0.5kb downstream 0.5kb downstream 500 false Scaffold248: 382834-383333 Capsella grandiflora
Cagra.0248s0107 1.0kb upstream 1.0kb upstream 2246 true Scaffold248: 380588-382833 Capsella grandiflora
Cagra.0248s0107 1.0kb upstream 1.0kb upstream 1000 false Scaffold248: 380588-381587 Capsella grandiflora
Cagra.0248s0107 1.0kb downstream 1.0kb downstream 2246 true Scaffold248: 381588-383833 Capsella grandiflora
Cagra.0248s0107 1.0kb downstream 1.0kb downstream 1000 false Scaffold248: 382834-383833 Capsella grandiflora
Cagra.0248s0107 2.0kb upstream 2.0kb upstream 3246 true Scaffold248: 379588-382833 Capsella grandiflora
Cagra.0248s0107 2.0kb upstream 2.0kb upstream 2000 false Scaffold248: 379588-381587 Capsella grandiflora
Cagra.0248s0107 2.0kb downstream 2.0kb downstream 3246 true Scaffold248: 381588-384833 Capsella grandiflora
Cagra.0248s0107 2.0kb downstream 2.0kb downstream 2000 false Scaffold248: 382834-384833 Capsella grandiflora
Cagra.0248s0107 5.0kb upstream 5.0kb upstream 6246 true Scaffold248: 376588-382833 Capsella grandiflora
Cagra.0248s0107 5.0kb upstream 5.0kb upstream 5000 false Scaffold248: 376588-381587 Capsella grandiflora
Cagra.0248s0107 5.0kb downstream 5.0kb downstream 6246 true Scaffold248: 381588-387833 Capsella grandiflora
Cagra.0248s0107 5.0kb downstream 5.0kb downstream 5000 false Scaffold248: 382834-387833 Capsella grandiflora
Cagra.0248s0107 10.0kb upstream 10.0kb upstream 11246 true Scaffold248: 371588-382833 Capsella grandiflora
Cagra.0248s0107 10.0kb upstream 10.0kb upstream 10000 false Scaffold248: 371588-381587 Capsella grandiflora
Cagra.0248s0107 10.0kb downstream 10.0kb downstream 11246 true Scaffold248: 381588-392833 Capsella grandiflora
Cagra.0248s0107 10.0kb downstream 10.0kb downstream 10000 false Scaffold248: 382834-392833 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122791521 5272 Eudicot View MSA
122367466 5261 Brassicaceae View MSA
123834476 5264 Brassicales-Malvales View MSA
124342463 5266 SBM View MSA
124250375 5268 Malvidae View MSA
124070844 5270 Rosid View MSA
123746881 5271 Pentapetalae View MSA
122046838 5273 Angiosperm View MSA
121351467 5274 Embryophyte View MSA
123382178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain