Gene : Cagra.24722s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31080:SF8 - F23N19.12 Genomic Order:  1
Name:  ? Cagra.24722s0001 Secondary Identifier:  ? PAC:28908286
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1081 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.24722s0001 0.5kb upstream 0.5kb upstream 1322 true Scaffold24722: 23-1344 Capsella grandiflora
Cagra.24722s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold24722: 845-1344 Capsella grandiflora
Cagra.24722s0001 0.5kb downstream 0.5kb downstream 844 true Scaffold24722: 1-844 Capsella grandiflora
Cagra.24722s0001 0.5kb downstream 0.5kb downstream 22 false Scaffold24722: 1-22 Capsella grandiflora
Cagra.24722s0001 1.0kb upstream 1.0kb upstream 1822 true Scaffold24722: 23-1844 Capsella grandiflora
Cagra.24722s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold24722: 845-1844 Capsella grandiflora
Cagra.24722s0001 1.0kb downstream 1.0kb downstream 844 true Scaffold24722: 1-844 Capsella grandiflora
Cagra.24722s0001 1.0kb downstream 1.0kb downstream 22 false Scaffold24722: 1-22 Capsella grandiflora
Cagra.24722s0001 2.0kb upstream 2.0kb upstream 2050 true Scaffold24722: 23-2072 Capsella grandiflora
Cagra.24722s0001 2.0kb upstream 2.0kb upstream 1228 false Scaffold24722: 845-2072 Capsella grandiflora
Cagra.24722s0001 2.0kb downstream 2.0kb downstream 844 true Scaffold24722: 1-844 Capsella grandiflora
Cagra.24722s0001 2.0kb downstream 2.0kb downstream 22 false Scaffold24722: 1-22 Capsella grandiflora
Cagra.24722s0001 5.0kb upstream 5.0kb upstream 2050 true Scaffold24722: 23-2072 Capsella grandiflora
Cagra.24722s0001 5.0kb upstream 5.0kb upstream 1228 false Scaffold24722: 845-2072 Capsella grandiflora
Cagra.24722s0001 5.0kb downstream 5.0kb downstream 844 true Scaffold24722: 1-844 Capsella grandiflora
Cagra.24722s0001 5.0kb downstream 5.0kb downstream 22 false Scaffold24722: 1-22 Capsella grandiflora
Cagra.24722s0001 10.0kb upstream 10.0kb upstream 2050 true Scaffold24722: 23-2072 Capsella grandiflora
Cagra.24722s0001 10.0kb upstream 10.0kb upstream 1228 false Scaffold24722: 845-2072 Capsella grandiflora
Cagra.24722s0001 10.0kb downstream 10.0kb downstream 844 true Scaffold24722: 1-844 Capsella grandiflora
Cagra.24722s0001 10.0kb downstream 10.0kb downstream 22 false Scaffold24722: 1-22 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343319 5261 Brassicaceae View MSA
123783558 5264 Brassicales-Malvales View MSA
124281783 5266 SBM View MSA
124251133 5268 Malvidae View MSA
124072666 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain