Gene : Cagra.0248s0007 C. grandiflora v1.1
Defline:  (1 of 58) PF07983 - X8 domain (X8) Genomic Order:  7
Name:  ? Cagra.0248s0007 Secondary Identifier:  ? PAC:28918889
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0248s0007 0.5kb upstream 0.5kb upstream 893 true Scaffold248: 23270-24162 Capsella grandiflora
Cagra.0248s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold248: 23663-24162 Capsella grandiflora
Cagra.0248s0007 0.5kb downstream 0.5kb downstream 893 true Scaffold248: 22770-23662 Capsella grandiflora
Cagra.0248s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold248: 22770-23269 Capsella grandiflora
Cagra.0248s0007 1.0kb upstream 1.0kb upstream 1393 true Scaffold248: 23270-24662 Capsella grandiflora
Cagra.0248s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold248: 23663-24662 Capsella grandiflora
Cagra.0248s0007 1.0kb downstream 1.0kb downstream 1393 true Scaffold248: 22270-23662 Capsella grandiflora
Cagra.0248s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold248: 22270-23269 Capsella grandiflora
Cagra.0248s0007 2.0kb upstream 2.0kb upstream 2393 true Scaffold248: 23270-25662 Capsella grandiflora
Cagra.0248s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold248: 23663-25662 Capsella grandiflora
Cagra.0248s0007 2.0kb downstream 2.0kb downstream 2393 true Scaffold248: 21270-23662 Capsella grandiflora
Cagra.0248s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold248: 21270-23269 Capsella grandiflora
Cagra.0248s0007 5.0kb upstream 5.0kb upstream 5393 true Scaffold248: 23270-28662 Capsella grandiflora
Cagra.0248s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold248: 23663-28662 Capsella grandiflora
Cagra.0248s0007 5.0kb downstream 5.0kb downstream 5393 true Scaffold248: 18270-23662 Capsella grandiflora
Cagra.0248s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold248: 18270-23269 Capsella grandiflora
Cagra.0248s0007 10.0kb upstream 10.0kb upstream 10393 true Scaffold248: 23270-33662 Capsella grandiflora
Cagra.0248s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold248: 23663-33662 Capsella grandiflora
Cagra.0248s0007 10.0kb downstream 10.0kb downstream 10393 true Scaffold248: 13270-23662 Capsella grandiflora
Cagra.0248s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold248: 13270-23269 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366714 5261 Brassicaceae View MSA
123799230 5264 Brassicales-Malvales View MSA
124296776 5266 SBM View MSA
124251717 5268 Malvidae View MSA
124064173 5270 Rosid View MSA
123753343 5271 Pentapetalae View MSA
122794093 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain