Gene : Cagra.2460s0045 C. grandiflora v1.1
Defline:  (1 of 33) PF05678 - VQ motif (VQ) Genomic Order:  45
Name:  ? Cagra.2460s0045 Secondary Identifier:  ? PAC:28897541
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Sequence Feature Displayer

Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2460s0045 0.5kb upstream 0.5kb upstream 1469 true Scaffold2460: 147794-149262 Capsella grandiflora
Cagra.2460s0045 0.5kb upstream 0.5kb upstream 500 false Scaffold2460: 147794-148293 Capsella grandiflora
Cagra.2460s0045 0.5kb downstream 0.5kb downstream 1469 true Scaffold2460: 148294-149762 Capsella grandiflora
Cagra.2460s0045 0.5kb downstream 0.5kb downstream 500 false Scaffold2460: 149263-149762 Capsella grandiflora
Cagra.2460s0045 1.0kb upstream 1.0kb upstream 1969 true Scaffold2460: 147294-149262 Capsella grandiflora
Cagra.2460s0045 1.0kb upstream 1.0kb upstream 1000 false Scaffold2460: 147294-148293 Capsella grandiflora
Cagra.2460s0045 1.0kb downstream 1.0kb downstream 1969 true Scaffold2460: 148294-150262 Capsella grandiflora
Cagra.2460s0045 1.0kb downstream 1.0kb downstream 1000 false Scaffold2460: 149263-150262 Capsella grandiflora
Cagra.2460s0045 2.0kb upstream 2.0kb upstream 2969 true Scaffold2460: 146294-149262 Capsella grandiflora
Cagra.2460s0045 2.0kb upstream 2.0kb upstream 2000 false Scaffold2460: 146294-148293 Capsella grandiflora
Cagra.2460s0045 2.0kb downstream 2.0kb downstream 2969 true Scaffold2460: 148294-151262 Capsella grandiflora
Cagra.2460s0045 2.0kb downstream 2.0kb downstream 2000 false Scaffold2460: 149263-151262 Capsella grandiflora
Cagra.2460s0045 5.0kb upstream 5.0kb upstream 5969 true Scaffold2460: 143294-149262 Capsella grandiflora
Cagra.2460s0045 5.0kb upstream 5.0kb upstream 5000 false Scaffold2460: 143294-148293 Capsella grandiflora
Cagra.2460s0045 5.0kb downstream 5.0kb downstream 5969 true Scaffold2460: 148294-154262 Capsella grandiflora
Cagra.2460s0045 5.0kb downstream 5.0kb downstream 5000 false Scaffold2460: 149263-154262 Capsella grandiflora
Cagra.2460s0045 10.0kb upstream 10.0kb upstream 10969 true Scaffold2460: 138294-149262 Capsella grandiflora
Cagra.2460s0045 10.0kb upstream 10.0kb upstream 10000 false Scaffold2460: 138294-148293 Capsella grandiflora
Cagra.2460s0045 10.0kb downstream 10.0kb downstream 10969 true Scaffold2460: 148294-159262 Capsella grandiflora
Cagra.2460s0045 10.0kb downstream 10.0kb downstream 10000 false Scaffold2460: 149263-159262 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362111 5261 Brassicaceae View MSA
123798311 5264 Brassicales-Malvales View MSA
124350510 5266 SBM View MSA
124252268 5268 Malvidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain