Gene : Cagra.2566s0006 C. grandiflora v1.1
Defline:  (1 of 2) 4.1.2.53 - 2-keto-3-deoxy-L-rhamnonate aldolase / KDR aldolase Genomic Order:  6
Name:  ? Cagra.2566s0006 Secondary Identifier:  ? PAC:28906568
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2566s0006 0.5kb upstream 0.5kb upstream 1226 true Scaffold2566: 17351-18576 Capsella grandiflora
Cagra.2566s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold2566: 18077-18576 Capsella grandiflora
Cagra.2566s0006 0.5kb downstream 0.5kb downstream 1226 true Scaffold2566: 16851-18076 Capsella grandiflora
Cagra.2566s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold2566: 16851-17350 Capsella grandiflora
Cagra.2566s0006 1.0kb upstream 1.0kb upstream 1726 true Scaffold2566: 17351-19076 Capsella grandiflora
Cagra.2566s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold2566: 18077-19076 Capsella grandiflora
Cagra.2566s0006 1.0kb downstream 1.0kb downstream 1726 true Scaffold2566: 16351-18076 Capsella grandiflora
Cagra.2566s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold2566: 16351-17350 Capsella grandiflora
Cagra.2566s0006 2.0kb upstream 2.0kb upstream 2726 true Scaffold2566: 17351-20076 Capsella grandiflora
Cagra.2566s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold2566: 18077-20076 Capsella grandiflora
Cagra.2566s0006 2.0kb downstream 2.0kb downstream 2726 true Scaffold2566: 15351-18076 Capsella grandiflora
Cagra.2566s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold2566: 15351-17350 Capsella grandiflora
Cagra.2566s0006 5.0kb upstream 5.0kb upstream 5726 true Scaffold2566: 17351-23076 Capsella grandiflora
Cagra.2566s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold2566: 18077-23076 Capsella grandiflora
Cagra.2566s0006 5.0kb downstream 5.0kb downstream 5726 true Scaffold2566: 12351-18076 Capsella grandiflora
Cagra.2566s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold2566: 12351-17350 Capsella grandiflora
Cagra.2566s0006 10.0kb upstream 10.0kb upstream 10726 true Scaffold2566: 17351-28076 Capsella grandiflora
Cagra.2566s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold2566: 18077-28076 Capsella grandiflora
Cagra.2566s0006 10.0kb downstream 10.0kb downstream 10726 true Scaffold2566: 7351-18076 Capsella grandiflora
Cagra.2566s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold2566: 7351-17350 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333309 5261 Brassicaceae Singleton cluster - no MSA
123837781 5264 Brassicales-Malvales View MSA
124322353 5266 SBM View MSA
124249871 5268 Malvidae View MSA
124061282 5270 Rosid View MSA
123741108 5271 Pentapetalae View MSA
122791173 5272 Eudicot View MSA
122045726 5273 Angiosperm View MSA
121345930 5274 Embryophyte View MSA
123426145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain