Gene : Cagra.25428s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33057:SF33 - EXPRESSED PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.25428s0001 Secondary Identifier:  ? PAC:28898611
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.25428s0001 0.5kb upstream 0.5kb upstream 1346 true Scaffold25428: 159-1504 Capsella grandiflora
Cagra.25428s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold25428: 159-658 Capsella grandiflora
Cagra.25428s0001 0.5kb downstream 0.5kb downstream 1346 true Scaffold25428: 659-2004 Capsella grandiflora
Cagra.25428s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold25428: 1505-2004 Capsella grandiflora
Cagra.25428s0001 1.0kb upstream 1.0kb upstream 1504 true Scaffold25428: 1-1504 Capsella grandiflora
Cagra.25428s0001 1.0kb upstream 1.0kb upstream 658 false Scaffold25428: 1-658 Capsella grandiflora
Cagra.25428s0001 1.0kb downstream 1.0kb downstream 1440 true Scaffold25428: 659-2098 Capsella grandiflora
Cagra.25428s0001 1.0kb downstream 1.0kb downstream 594 false Scaffold25428: 1505-2098 Capsella grandiflora
Cagra.25428s0001 2.0kb upstream 2.0kb upstream 1504 true Scaffold25428: 1-1504 Capsella grandiflora
Cagra.25428s0001 2.0kb upstream 2.0kb upstream 658 false Scaffold25428: 1-658 Capsella grandiflora
Cagra.25428s0001 2.0kb downstream 2.0kb downstream 1440 true Scaffold25428: 659-2098 Capsella grandiflora
Cagra.25428s0001 2.0kb downstream 2.0kb downstream 594 false Scaffold25428: 1505-2098 Capsella grandiflora
Cagra.25428s0001 5.0kb upstream 5.0kb upstream 1504 true Scaffold25428: 1-1504 Capsella grandiflora
Cagra.25428s0001 5.0kb upstream 5.0kb upstream 658 false Scaffold25428: 1-658 Capsella grandiflora
Cagra.25428s0001 5.0kb downstream 5.0kb downstream 1440 true Scaffold25428: 659-2098 Capsella grandiflora
Cagra.25428s0001 5.0kb downstream 5.0kb downstream 594 false Scaffold25428: 1505-2098 Capsella grandiflora
Cagra.25428s0001 10.0kb upstream 10.0kb upstream 1504 true Scaffold25428: 1-1504 Capsella grandiflora
Cagra.25428s0001 10.0kb upstream 10.0kb upstream 658 false Scaffold25428: 1-658 Capsella grandiflora
Cagra.25428s0001 10.0kb downstream 10.0kb downstream 1440 true Scaffold25428: 659-2098 Capsella grandiflora
Cagra.25428s0001 10.0kb downstream 10.0kb downstream 594 false Scaffold25428: 1505-2098 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376765 5261 Brassicaceae View MSA
123801352 5264 Brassicales-Malvales View MSA
124351307 5266 SBM View MSA
124253627 5268 Malvidae View MSA
124071458 5270 Rosid View MSA
123749654 5271 Pentapetalae View MSA
122787439 5272 Eudicot View MSA
122050214 5273 Angiosperm View MSA
121311801 5274 Embryophyte View MSA
123349046 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain