Gene : Cagra.25489s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31509:SF6 - F5M15.16 Genomic Order:  9
Name:  ? Cagra.25489s0009 Secondary Identifier:  ? PAC:28897856
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.25489s0009 0.5kb upstream 0.5kb upstream 1202 true Scaffold25489: 21963-23164 Capsella grandiflora
Cagra.25489s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold25489: 22665-23164 Capsella grandiflora
Cagra.25489s0009 0.5kb downstream 0.5kb downstream 1202 true Scaffold25489: 21463-22664 Capsella grandiflora
Cagra.25489s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold25489: 21463-21962 Capsella grandiflora
Cagra.25489s0009 1.0kb upstream 1.0kb upstream 1702 true Scaffold25489: 21963-23664 Capsella grandiflora
Cagra.25489s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold25489: 22665-23664 Capsella grandiflora
Cagra.25489s0009 1.0kb downstream 1.0kb downstream 1702 true Scaffold25489: 20963-22664 Capsella grandiflora
Cagra.25489s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold25489: 20963-21962 Capsella grandiflora
Cagra.25489s0009 2.0kb upstream 2.0kb upstream 2702 true Scaffold25489: 21963-24664 Capsella grandiflora
Cagra.25489s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold25489: 22665-24664 Capsella grandiflora
Cagra.25489s0009 2.0kb downstream 2.0kb downstream 2702 true Scaffold25489: 19963-22664 Capsella grandiflora
Cagra.25489s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold25489: 19963-21962 Capsella grandiflora
Cagra.25489s0009 5.0kb upstream 5.0kb upstream 5702 true Scaffold25489: 21963-27664 Capsella grandiflora
Cagra.25489s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold25489: 22665-27664 Capsella grandiflora
Cagra.25489s0009 5.0kb downstream 5.0kb downstream 5702 true Scaffold25489: 16963-22664 Capsella grandiflora
Cagra.25489s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold25489: 16963-21962 Capsella grandiflora
Cagra.25489s0009 10.0kb upstream 10.0kb upstream 7459 true Scaffold25489: 21963-29421 Capsella grandiflora
Cagra.25489s0009 10.0kb upstream 10.0kb upstream 6757 false Scaffold25489: 22665-29421 Capsella grandiflora
Cagra.25489s0009 10.0kb downstream 10.0kb downstream 10702 true Scaffold25489: 11963-22664 Capsella grandiflora
Cagra.25489s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold25489: 11963-21962 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378395 5261 Brassicaceae View MSA
123838857 5264 Brassicales-Malvales View MSA
124322506 5266 SBM View MSA
124238730 5268 Malvidae View MSA
124066569 5270 Rosid View MSA
123738902 5271 Pentapetalae View MSA
122788328 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain