Gene : Cagra.2519s0003 C. grandiflora v1.1
Defline:  (1 of 4) PF00139//PF07714 - Legume lectin domain (Lectin_legB) // Protein tyrosine kinase (Pkinase_Tyr) Genomic Order:  3
Name:  ? Cagra.2519s0003 Secondary Identifier:  ? PAC:28903984
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2519s0003 0.5kb upstream 0.5kb upstream 2899 true Scaffold2519: 6808-9706 Capsella grandiflora
Cagra.2519s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2519: 6808-7307 Capsella grandiflora
Cagra.2519s0003 0.5kb downstream 0.5kb downstream 2899 true Scaffold2519: 7308-10206 Capsella grandiflora
Cagra.2519s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2519: 9707-10206 Capsella grandiflora
Cagra.2519s0003 1.0kb upstream 1.0kb upstream 3399 true Scaffold2519: 6308-9706 Capsella grandiflora
Cagra.2519s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2519: 6308-7307 Capsella grandiflora
Cagra.2519s0003 1.0kb downstream 1.0kb downstream 3399 true Scaffold2519: 7308-10706 Capsella grandiflora
Cagra.2519s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2519: 9707-10706 Capsella grandiflora
Cagra.2519s0003 2.0kb upstream 2.0kb upstream 4399 true Scaffold2519: 5308-9706 Capsella grandiflora
Cagra.2519s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2519: 5308-7307 Capsella grandiflora
Cagra.2519s0003 2.0kb downstream 2.0kb downstream 4399 true Scaffold2519: 7308-11706 Capsella grandiflora
Cagra.2519s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2519: 9707-11706 Capsella grandiflora
Cagra.2519s0003 5.0kb upstream 5.0kb upstream 7399 true Scaffold2519: 2308-9706 Capsella grandiflora
Cagra.2519s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2519: 2308-7307 Capsella grandiflora
Cagra.2519s0003 5.0kb downstream 5.0kb downstream 7399 true Scaffold2519: 7308-14706 Capsella grandiflora
Cagra.2519s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2519: 9707-14706 Capsella grandiflora
Cagra.2519s0003 10.0kb upstream 10.0kb upstream 9706 true Scaffold2519: 1-9706 Capsella grandiflora
Cagra.2519s0003 10.0kb upstream 10.0kb upstream 7307 false Scaffold2519: 1-7307 Capsella grandiflora
Cagra.2519s0003 10.0kb downstream 10.0kb downstream 12399 true Scaffold2519: 7308-19706 Capsella grandiflora
Cagra.2519s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold2519: 9707-19706 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366360 5261 Brassicaceae View MSA
123837420 5264 Brassicales-Malvales View MSA
124351226 5266 SBM View MSA
124252554 5268 Malvidae View MSA
124071710 5270 Rosid View MSA
123746397 5271 Pentapetalae View MSA
122771896 5272 Eudicot View MSA
122049329 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain