Gene : Cagra.2516s0021 C. grandiflora v1.1
Defline:  (1 of 3) PTHR32077:SF6 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13-RELATED Genomic Order:  21
Name:  ? Cagra.2516s0021 Secondary Identifier:  ? PAC:28900722
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2516s0021 0.5kb upstream 0.5kb upstream 1229 true Scaffold2516: 67872-69100 Capsella grandiflora
Cagra.2516s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold2516: 68601-69100 Capsella grandiflora
Cagra.2516s0021 0.5kb downstream 0.5kb downstream 1229 true Scaffold2516: 67372-68600 Capsella grandiflora
Cagra.2516s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold2516: 67372-67871 Capsella grandiflora
Cagra.2516s0021 1.0kb upstream 1.0kb upstream 1729 true Scaffold2516: 67872-69600 Capsella grandiflora
Cagra.2516s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold2516: 68601-69600 Capsella grandiflora
Cagra.2516s0021 1.0kb downstream 1.0kb downstream 1729 true Scaffold2516: 66872-68600 Capsella grandiflora
Cagra.2516s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold2516: 66872-67871 Capsella grandiflora
Cagra.2516s0021 2.0kb upstream 2.0kb upstream 2729 true Scaffold2516: 67872-70600 Capsella grandiflora
Cagra.2516s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold2516: 68601-70600 Capsella grandiflora
Cagra.2516s0021 2.0kb downstream 2.0kb downstream 2729 true Scaffold2516: 65872-68600 Capsella grandiflora
Cagra.2516s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold2516: 65872-67871 Capsella grandiflora
Cagra.2516s0021 5.0kb upstream 5.0kb upstream 5729 true Scaffold2516: 67872-73600 Capsella grandiflora
Cagra.2516s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold2516: 68601-73600 Capsella grandiflora
Cagra.2516s0021 5.0kb downstream 5.0kb downstream 5729 true Scaffold2516: 62872-68600 Capsella grandiflora
Cagra.2516s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold2516: 62872-67871 Capsella grandiflora
Cagra.2516s0021 10.0kb upstream 10.0kb upstream 10729 true Scaffold2516: 67872-78600 Capsella grandiflora
Cagra.2516s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold2516: 68601-78600 Capsella grandiflora
Cagra.2516s0021 10.0kb downstream 10.0kb downstream 10729 true Scaffold2516: 57872-68600 Capsella grandiflora
Cagra.2516s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold2516: 57872-67871 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377766 5261 Brassicaceae View MSA
123801630 5264 Brassicales-Malvales View MSA
124298908 5266 SBM View MSA
124252572 5268 Malvidae View MSA
124064372 5270 Rosid View MSA
123738115 5271 Pentapetalae View MSA
122787076 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain