Gene : Cagra.2519s0038 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11661//PTHR11661:SF6 - 60S RIBOSOMAL PROTEIN L12 Genomic Order:  38
Name:  ? Cagra.2519s0038 Secondary Identifier:  ? PAC:28903951
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2519s0038 0.5kb upstream 0.5kb upstream 1001 true Scaffold2519: 119162-120162 Capsella grandiflora
Cagra.2519s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold2519: 119663-120162 Capsella grandiflora
Cagra.2519s0038 0.5kb downstream 0.5kb downstream 1001 true Scaffold2519: 118662-119662 Capsella grandiflora
Cagra.2519s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold2519: 118662-119161 Capsella grandiflora
Cagra.2519s0038 1.0kb upstream 1.0kb upstream 1501 true Scaffold2519: 119162-120662 Capsella grandiflora
Cagra.2519s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold2519: 119663-120662 Capsella grandiflora
Cagra.2519s0038 1.0kb downstream 1.0kb downstream 1501 true Scaffold2519: 118162-119662 Capsella grandiflora
Cagra.2519s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold2519: 118162-119161 Capsella grandiflora
Cagra.2519s0038 2.0kb upstream 2.0kb upstream 2501 true Scaffold2519: 119162-121662 Capsella grandiflora
Cagra.2519s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold2519: 119663-121662 Capsella grandiflora
Cagra.2519s0038 2.0kb downstream 2.0kb downstream 2501 true Scaffold2519: 117162-119662 Capsella grandiflora
Cagra.2519s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold2519: 117162-119161 Capsella grandiflora
Cagra.2519s0038 5.0kb upstream 5.0kb upstream 5501 true Scaffold2519: 119162-124662 Capsella grandiflora
Cagra.2519s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold2519: 119663-124662 Capsella grandiflora
Cagra.2519s0038 5.0kb downstream 5.0kb downstream 5501 true Scaffold2519: 114162-119662 Capsella grandiflora
Cagra.2519s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold2519: 114162-119161 Capsella grandiflora
Cagra.2519s0038 10.0kb upstream 10.0kb upstream 10501 true Scaffold2519: 119162-129662 Capsella grandiflora
Cagra.2519s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold2519: 119663-129662 Capsella grandiflora
Cagra.2519s0038 10.0kb downstream 10.0kb downstream 10501 true Scaffold2519: 109162-119662 Capsella grandiflora
Cagra.2519s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold2519: 109162-119161 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378383 5261 Brassicaceae View MSA
123836781 5264 Brassicales-Malvales View MSA
124350930 5266 SBM View MSA
124254626 5268 Malvidae View MSA
124068553 5270 Rosid View MSA
123746729 5271 Pentapetalae View MSA
122788263 5272 Eudicot View MSA
122050201 5273 Angiosperm View MSA
121345263 5274 Embryophyte View MSA
123424135 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain